RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 C1RP00736 705 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 CD48P09326 243 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ZDHHC11BP0C7U3 371 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ZNF806P0C7X5 589 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SPATA31D3P0C874 917 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 NCAM1P13591 858 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 CPB1P15086 417 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 TGM2P21980 687 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 GJC1P36383 396 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 NR2C2P49116 596 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 GLUD2P49448 558 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 YWHAGP61981 247 aaKnown RBP eCLIP12.34□□□□□ -0.43
GGA3-217ENST00000583667 ROR1Q01973 937 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 CREMQ03060 361 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 PTK6Q13882 451 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 BYSLQ13895 437 aaKnown RBP12.34□□□□□ -0.43
GGA3-217ENST00000583667 PPP2R5DQ14738 602 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SMTNL2Q2TAL5 461 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 BRMS1LQ5PSV4 323 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SNX30Q5VWJ9 437 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ZNF852Q6ZMS4 543 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 RNF19BQ6ZMZ0 732 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SPATA31D4Q6ZUB0 917 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 HDXQ7Z353 690 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 MREGQ8N565 214 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 CCDC89Q8N998 374 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 ATAD1Q8NBU5 361 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SCAMP5Q8TAC9 235 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 CLSTN3Q9BQT9 956 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 SCNM1Q9BWG6 230 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 MAK16Q9BXY0 300 aaKnown RBP12.34□□□□□ -0.43
GGA3-217ENST00000583667 OSBPL2Q9H1P3 480 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
GGA3-217ENST00000583667 PIGVQ9NUD9 493 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 FAM53CQ9NYF3 392 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 WHRNQ9P202 907 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 AP4E1Q9UPM8 1137 aa12.34□□□□□ -0.43
GGA3-217ENST00000583667 WDR27A2RRH5 827 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 NDC80O14777 642 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ZMYND10O75800 440 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ZNF189O75820 626 aaPredicted RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 MYBL2P10244 700 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ATF2P15336 505 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ITIH2P19823 946 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 IVDP26440 423 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 YWHAQP27348 245 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ECHS1P30084 290 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 HTR7P34969 479 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 CNR2P34972 360 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 KCNJ1P48048 391 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 MRPS25P82663 173 aaKnown RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 CAV1Q03135 178 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 SEMA3BQ13214 749 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 MTA1Q13330 715 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 XRCC4Q13426 336 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 KRT81Q14533 505 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 CA9Q16790 459 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 DDR2Q16832 855 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ZC3H12AQ5D1E8 599 aaKnown RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 SPDYCQ5MJ68 293 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ACBD5Q5T8D3 534 aaPredicted RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 ELMSAN1Q6PJG2 1045 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 DENND5BQ6ZUT9 1274 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 SND1Q7KZF4 910 aaKnown RBP eCLIP12.33□□□□□ -0.44
GGA3-217ENST00000583667 PDZD3Q86UT5 571 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 SCN4BQ8IWT1 228 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 PQLC3Q8N755 202 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 PLD5Q8N7P1 536 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 PCDH19Q8TAB3 1148 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 DQX1Q8TE96 717 aaKnown RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 OVCA2Q8WZ82 227 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 B3GALT6Q96L58 329 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 CALN1Q9BXU9 219 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ARRDC1-AS1Q9H2J1 176 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 CHRDQ9H2X0 955 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ZDHHC18Q9NUE0 388 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 KLHL11Q9NVR0 708 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 MRPS17Q9Y2R5 130 aaKnown RBP12.33□□□□□ -0.44
GGA3-217ENST00000583667 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
GGA3-217ENST00000583667 ZSCAN5CA6NGD5 496 aaPredicted RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 CHURC1-FNTBB4DL54 471 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 C2CD2LO14523 706 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 AXIN1O15169 862 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 TEX28O15482 410 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 DAPK3O43293 454 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 GLUD1P00367 558 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 FSHRP23945 695 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 OR1D2P34982 312 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 FNTBP49356 437 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 NOVA1P51513 510 aaKnown RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 PITX1P78337 314 aaPredicted RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 NRG1Q02297 640 aaPredicted RBP12.32□□□□□ -0.44
GGA3-217ENST00000583667 DUSP4Q13115 394 aa12.32□□□□□ -0.44
GGA3-217ENST00000583667 CBLBQ13191 982 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms