RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 RTN2O75298 545 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 FTLP02792 175 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 DLDP09622 509 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 GZMAP12544 262 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 HLA-EP13747 358 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 NUMBP49757 651 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 ST8SIA6P61647 398 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF177Q13360 481 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 TRIM14Q14142 442 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 ACBD5Q5T8D3 534 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 HGSNATQ68CP4 663 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 LAIR1Q6GTX8 287 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 KBTBD6Q86V97 674 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 FAM160A2Q8N612 972 aaPredicted RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF366Q8N895 744 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 RLN3Q8WXF3 142 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 LMLNQ96KR4 655 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 SLC6A17Q9H1V8 727 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 INTS6Q9UL03 887 aaKnown RBP12.99□□□□□ -0.33
SMARCE1-218ENST00000582955 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 E9PAM4 449 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CLDN11O75508 207 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CNTN5O94779 1100 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ASLP04424 464 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 TPM1P09493 284 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 NDUFV2P19404 249 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 MZF1P28698 734 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ADRA1BP35368 520 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF143P52747 638 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CDH4P55283 916 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 OXCT1P55809 520 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 HDAC4P56524 1084 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 SLC12A1Q13621 1099 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ENPP2Q13822 863 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 BYSLQ13895 437 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ELF2Q15723 593 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 PTPRNQ16849 979 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 PLEKHG6Q3KR16 790 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 RNF219Q5W0B1 726 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CXorf57Q6NSI4 855 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 SCYL2Q6P3W7 929 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 VSTM4Q8IW00 320 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 APCDD1Q8J025 514 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 DCLK2Q8N568 766 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CENPIQ92674 756 aaPredicted RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 TTC17Q96AE7 1141 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 TRIM11Q96F44 468 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 C1orf74Q96LT6 269 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CD248Q9HCU0 757 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 MYO1AQ9UBC5 1043 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 CNOT8Q9UFF9 292 aaKnown RBP12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 ADAMTS1Q9UHI8 967 aa12.98□□□□□ -0.33
SMARCE1-218ENST00000582955 GPR179Q6PRD1 2367 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MAP3K13O43283 966 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 RHOBTB1O94844 696 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 RHOCP08134 193 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 BCKDHBP21953 392 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 PSMA2P25787 234 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 P2RY2P41231 377 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MAMLD1Q13495 774 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 PLK5Q496M5 336 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 ALFQ53S48 1182 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 PLEKHA7Q6IQ23 1121 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 TMC6Q7Z403 805 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 TFAP2DQ7Z6R9 452 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 CACUL1Q86Y37 369 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF683Q8IZ20 524 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 CCDC185Q8N715 623 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MRGPRX1Q96LB2 322 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 TRIM5Q9C035 493 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MUC3BQ9H195 1237 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 TMEM245Q9H330 911 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 PRDM16Q9HAZ2 1276 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNHIT6Q9NWK9 470 aaKnown RBP12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MPP6Q9NZW5 540 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 ERVW-1Q9UQF0 538 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 SCINQ9Y6U3 715 aa12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 MUC22E2RYF6 1773 aaPredicted RBP12.97□□□□□ -0.33
SMARCE1-218ENST00000582955 IGLV3-10A0A075B6K4 115 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 DRGXA6NNA5 263 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ZNF217O75362 1048 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 RETP07949 1114 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 SRPRAP08240 638 aaKnown RBP12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 MYBL1P10243 752 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 OR1E1P30953 314 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 ECT2LQ008S8 904 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 OGDHQ02218 1023 aa12.96□□□□□ -0.33
SMARCE1-218ENST00000582955 TSR1Q2NL82 804 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms