RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, humanhuman

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-208ENST00000580584 PPM1JQ5JR12 505 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 TTC39BQ5VTQ0 682 aaPredicted RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 CXorf57Q6NSI4 855 aaKnown RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 C14orf80Q86SX3 495 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 ZNF677Q86XU0 584 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 DHX40Q8IX18 779 aaKnown RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 NT5C3BQ969T7 300 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 ZNF419Q96HQ0 510 aaPredicted RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 CFAP57Q96MR6 1250 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 ERGIC2Q96RQ1 377 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 TKTL2Q9H0I9 626 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 SIK2Q9H0K1 926 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 METTL5Q9NRN9 209 aaKnown RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 TMPRSS4Q9NRS4 437 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 ARHGEF38Q9NXL2 777 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 RRN3Q9NYV6 651 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 EVLQ9UI08 416 aaPredicted RBP16.01■□□□□ 0.15
PMP22-208ENST00000580584 ERVW-1Q9UQF0 538 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 DAAM1Q9Y4D1 1078 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 PLXND1Q9Y4D7 1925 aa16.01■□□□□ 0.15
PMP22-208ENST00000580584 ABCA7Q8IZY2 2146 aa16■□□□□ 0.15
PMP22-208ENST00000580584 TTC34A8MYJ7 566 aa16■□□□□ 0.15
PMP22-208ENST00000580584 CDX4O14627 284 aaPredicted RBP16■□□□□ 0.15
PMP22-208ENST00000580584 TM4SF5O14894 197 aa16■□□□□ 0.15
PMP22-208ENST00000580584 SIN3BO75182 1162 aa16■□□□□ 0.15
PMP22-208ENST00000580584 MOCS3O95396 460 aa16■□□□□ 0.15
PMP22-208ENST00000580584 IGLV3-19P01714 112 aa16■□□□□ 0.15
PMP22-208ENST00000580584 ENGP17813 658 aa16■□□□□ 0.15
PMP22-208ENST00000580584 MMP8P22894 467 aa16■□□□□ 0.15
PMP22-208ENST00000580584 MAOBP27338 520 aa16■□□□□ 0.15
PMP22-208ENST00000580584 HOXD12P35452 270 aa16■□□□□ 0.15
PMP22-208ENST00000580584 CXCR3P49682 368 aa16■□□□□ 0.15
PMP22-208ENST00000580584 STK19P49842 368 aaPredicted RBP16■□□□□ 0.15
PMP22-208ENST00000580584 RPS14P62263 151 aaKnown RBP16■□□□□ 0.15
PMP22-208ENST00000580584 ECT2LQ008S8 904 aa16■□□□□ 0.15
PMP22-208ENST00000580584 SLC25A52Q3SY17 297 aa16■□□□□ 0.15
PMP22-208ENST00000580584 BRMS1LQ5PSV4 323 aa16■□□□□ 0.15
PMP22-208ENST00000580584 SND1Q7KZF4 910 aaKnown RBP eCLIP16■□□□□ 0.155e-6■■□□□ 13.1
PMP22-208ENST00000580584 RGL4Q8IZJ4 473 aa16■□□□□ 0.15
PMP22-208ENST00000580584 EMC1Q8N766 993 aa16■□□□□ 0.15
PMP22-208ENST00000580584 OR52K2Q8NGK3 314 aa16■□□□□ 0.15
PMP22-208ENST00000580584 RPL10LQ96L21 214 aaKnown RBP16■□□□□ 0.15
PMP22-208ENST00000580584 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
PMP22-208ENST00000580584 C11orf70Q9BRQ4 267 aa16■□□□□ 0.15
PMP22-208ENST00000580584 NUSAP1Q9BXS6 441 aaKnown RBP16■□□□□ 0.15
PMP22-208ENST00000580584 WDCPQ9H6R7 721 aa16■□□□□ 0.15
PMP22-208ENST00000580584 TMEM9BQ9NQ34 198 aa16■□□□□ 0.15
PMP22-208ENST00000580584 TMEM59LQ9UK28 342 aa16■□□□□ 0.15
PMP22-208ENST00000580584 NCOR2Q9Y618 2525 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 TNRC6BQ9UPQ9 1833 aaKnown RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 THADAQ6YHU6 1953 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 MEI4A8MW99 385 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 TEX33O43247 280 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 GJB6O95452 261 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 DPP6P42658 865 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 DUOXA1Q1HG43 343 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 HNRNPA1L2Q32P51 320 aaKnown RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 RNF219Q5W0B1 726 aaPredicted RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 ZNF776Q68DI1 518 aaPredicted RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 SLC23A3Q6PIS1 610 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 FOXJ1Q92949 421 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 PGAP3Q96FM1 320 aaPredicted RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 BPIFA3Q9BQP9 254 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 NUP58Q9BVL2 599 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 FBRSQ9HAH7 460 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 SEPT11Q9NVA2 429 aaKnown RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 SUN2Q9UH99 717 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 SLCO3A1Q9UIG8 710 aa15.99■□□□□ 0.15
PMP22-208ENST00000580584 MYO18AQ92614 2054 aaKnown RBP15.99■□□□□ 0.15
PMP22-208ENST00000580584 CNTN5O94779 1100 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 F9P00740 461 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 DNTTP04053 509 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 SRPRAP08240 638 aaKnown RBP15.98■□□□□ 0.15
PMP22-208ENST00000580584 VAV1P15498 845 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 OXTRP30559 389 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 ACSL1P33121 698 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 RDXP35241 583 aaKnown RBP15.98■□□□□ 0.15
PMP22-208ENST00000580584 ATP11AP98196 1134 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 MTA1Q13330 715 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 UAP1L1Q3KQV9 507 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 RAB6CQ53S08 254 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 ALFQ53S48 1182 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 SYCP2LQ5T4T6 812 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 C9orf64Q5T6V5 341 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 TRIM72Q6ZMU5 477 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 FAM131BQ86XD5 332 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 CEP76Q8TAP6 659 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 GTPBP2Q9BX10 602 aaKnown RBP15.98■□□□□ 0.15
PMP22-208ENST00000580584 RAB6CQ9H0N0 254 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 MIR1-1HGQ9H1L0 117 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
PMP22-208ENST00000580584 CAPN10Q9HC96 672 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 SLC6A14Q9UN76 642 aa15.98■□□□□ 0.15
PMP22-208ENST00000580584 CKAP5Q14008 2032 aa15.97■□□□□ 0.15
PMP22-208ENST00000580584 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.97■□□□□ 0.15
PMP22-208ENST00000580584 SERPINF2P08697 491 aa15.97■□□□□ 0.15
PMP22-208ENST00000580584 UNGP13051 313 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms