RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 FAM133BQ5BKY9 247 aaKnown RBP12.54□□□□□ -0.4
CCDC84-209ENST00000580556 EFHC2Q5JST6 749 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 CYP4V2Q6ZWL3 525 aaPredicted RBP12.54□□□□□ -0.4
CCDC84-209ENST00000580556 LONP2Q86WA8 852 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 DENND1CQ8IV53 801 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 BBS7Q8IWZ6 715 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 CCDC185Q8N715 623 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 CD101Q93033 1021 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 TRPV5Q9NQA5 729 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 ANLNQ9NQW6 1124 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 FZD10Q9ULW2 581 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 ZKSCAN5Q9Y2L8 839 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
CCDC84-209ENST00000580556 ZFYVE26Q68DK2 2539 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 TMEM110-MUSTN1A8MSY1 372 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 MIF4GDA9UHW6 222 aaKnown RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 SPOPO43791 374 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 PALMO75781 387 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 KCNK5O95279 499 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 MOCS2O96007 188 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 IL1R2P27930 398 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 SOX9P48436 509 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 LIMK1P53667 647 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 MS4A13Q5J8X5 152 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 ERMARDQ5T6L9 678 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 STPG1Q5TH74 334 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 PIK3R6Q5UE93 754 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 TTC39BQ5VTQ0 682 aaPredicted RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 SCYL2Q6P3W7 929 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 CEP68Q76N32 757 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 VSIG1Q86XK7 387 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 YAF2Q8IY57 180 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 FAM71BQ8TC56 605 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 IRF7Q92985 503 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 PRMT1Q99873 361 aaKnown RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 IER2Q9BTL4 223 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 RETREG1Q9H6L5 497 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 DUS2Q9NX74 493 aaKnown RBP12.53□□□□□ -0.4
CCDC84-209ENST00000580556 AP4E1Q9UPM8 1137 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 HS3ST4Q9Y661 456 aa12.53□□□□□ -0.4
CCDC84-209ENST00000580556 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.4
CCDC84-209ENST00000580556 WDFY3Q8IZQ1 3526 aa12.52□□□□□ -0.4
CCDC84-209ENST00000580556 IGLV3-10A0A075B6K4 115 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 CCDC66A2RUB6 948 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 USP27XA6NNY8 438 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 ZNF487B1APH4 448 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 ARNTLO00327 626 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 GIPC1O14908 333 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 KIF5CO60282 957 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 NFATC1O95644 943 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 TOP3BO95985 862 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 TCF4P15884 667 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 L1CAMP32004 1257 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 CTNNA1P35221 906 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 IFNAR2P48551 515 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 PXNP49023 591 aaPredicted RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 TAS2R40P59535 323 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 SEMA3BQ13214 749 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 EML3Q32P44 896 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 C5orf22Q49AR2 442 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 MPP7Q5T2T1 576 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 MANEALQ5VSG8 457 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 DAB2IPQ5VWQ8 1189 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 RNF43Q68DV7 783 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 NADSYN1Q6IA69 706 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 PEX26Q7Z412 305 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 NT5DC3Q86UY8 548 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 CHSY1Q86X52 802 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 SPEM1Q8N4L4 309 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 GOLPH3Q9H4A6 298 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 TRMT1Q9NXH9 659 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 DDX56Q9NY93 547 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 MARK1Q9P0L2 795 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 RCOR3Q9P2K3 495 aaPredicted RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 PCSK1NQ9UHG2 260 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 XPO7Q9UIA9 1087 aaKnown RBP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC84-209ENST00000580556 WNT6Q9Y6F9 365 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 CEP295Q9C0D2 2601 aa12.52□□□□□ -0.41
CCDC84-209ENST00000580556 F5H5T6 163 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 ADH1CP00326 375 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 RARAP10276 462 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 TACR2P21452 398 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 CTNNA2P26232 953 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 CNR2P34972 360 aa12.51□□□□□ -0.41
CCDC84-209ENST00000580556 SSR1P43307 286 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms