RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SPATA31C2B4DYI2 1134 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 CBX4O00257 560 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 TRDMT1O14717 391 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 FAM58BPP0C7Q3 252 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 HSPA1AP0DMV8 641 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 HSPA1BP0DMV9 641 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 SLC26A2P50443 739 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 CDC42EP1Q00587 391 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 CERCAMQ5T4B2 595 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 MARC1Q5VT66 337 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 KYAT3Q6YP21 454 aaKnown RBP12.28□□□□□ -0.44
ERBB2-206ENST00000578373 GPR141Q7Z602 305 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 PYROXD2Q8N2H3 581 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 RCN3Q96D15 328 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 LPIN3Q9BQK8 851 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 TRIM62Q9BVG3 475 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 POMKQ9H5K3 350 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
ERBB2-206ENST00000578373 KDM1AO60341 852 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 SERPIND1P05546 499 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 HIST1H2AGP0C0S8 130 aaPredicted RBP12.27□□□□□ -0.44
ERBB2-206ENST00000578373 HIST1H2ADP20671 130 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 ATP6V1C1P21283 382 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 MFSD14CQ5VZR4 134 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 LPCAT2Q7L5N7 544 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 CLVS1Q8IUQ0 354 aaPredicted RBP12.27□□□□□ -0.44
ERBB2-206ENST00000578373 HIST1H2AHQ96KK5 128 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 HIST1H2AJQ99878 128 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 H2AFJQ9BTM1 129 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 SENP6Q9GZR1 1112 aaPredicted RBP12.27□□□□□ -0.44
ERBB2-206ENST00000578373 ELOVL4Q9GZR5 314 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 ALG9Q9H6U8 611 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 TMEM134Q9H6X4 195 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 CYLDQ9NQC7 956 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 SMPD4Q9NXE4 827 aa12.27□□□□□ -0.44
ERBB2-206ENST00000578373 TCRBV7S3A2A0A539 114 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 TMEM63AO94886 807 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 C16orf72Q14CZ0 275 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 GRTP1Q5TC63 336 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ADCK1Q86TW2 530 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SLC44A2Q8IWA5 706 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SNX31Q8N9S9 440 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 JADE3Q92613 823 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 AZIN2Q96A70 460 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ACE2Q9BYF1 805 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ARHGAP28Q9P2N2 729 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ADGRA3Q8IWK6 1321 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 DPPA5A6NC42 116 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 GRIA4P48058 902 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 PCYT1AP49585 367 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 FBXO48Q5FWF7 155 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 TREML2Q5T2D2 321 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SDHAF4Q5VUM1 108 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 NEPROQ6NW34 567 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 BNIPLQ7Z465 357 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 P2RY11Q96G91 374 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SENP8Q96LD8 212 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 MROH8Q9H579 483 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 TMEM59LQ9UK28 342 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SLIT3O75094 1523 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 FAM95CA0A1B0GW59 222 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF839A8K0R7 811 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 C9JVG2 144 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 PLA2G6O60733 806 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SOAT2O75908 522 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ODC1P11926 461 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 CLK1P49759 484 aaKnown RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 NR6A1Q15406 480 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 WLSQ5T9L3 541 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ZNF572Q7Z3I7 529 aaPredicted RBP12.27□□□□□ -0.45
ERBB2-206ENST00000578373 PLD5Q8N7P1 536 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 SERAC1Q96JX3 654 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ACOX2Q99424 681 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 CPNE1Q99829 537 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 MRIQ9BWK5 157 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 ROGDIQ9GZN7 287 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 WWOXQ9NZC7 414 aa12.27□□□□□ -0.45
ERBB2-206ENST00000578373 PTGES3LE9PB15 166 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 GPR25O00155 361 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 MGRN1O60291 552 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 TBC1D4O60343 1298 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 COX4I1P13073 169 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 UNC5BQ8IZJ1 945 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 TAGAPQ8N103 731 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 C1orf127Q8N9H9 656 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 LPPQ93052 612 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 WNT8BQ93098 351 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 SH3KBP1Q96B97 665 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 CINPQ9BW66 212 aaPredicted RBP12.26□□□□□ -0.45
ERBB2-206ENST00000578373 PAIP1Q9H074 479 aaKnown RBP12.26□□□□□ -0.45
ERBB2-206ENST00000578373 NXF3Q9H4D5 531 aaKnown RBP12.26□□□□□ -0.45
ERBB2-206ENST00000578373 RGS18Q9NS28 235 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 CROTQ9UKG9 612 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 CAPN8A6NHC0 703 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 CCDC166P0CW27 439 aa12.26□□□□□ -0.45
ERBB2-206ENST00000578373 NR2C2P49116 596 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms