RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	MYMK	A6NI61	221 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	ERVV-1	B6SEH8	477 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643		H7C4K7	107 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	FOXN3	O00409	490 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	SNX2	O60749	519 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	USP12	O75317	370 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	RNASEH2A	O75792	299 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	ZBED1	O96006	694 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	MYB	P10242	640 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	TXN	P10599	105 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	APEH	P13798	732 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	ZKSCAN1	P17029	563 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	NR4A2	P43354	598 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	PPM1F	P49593	454 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	GATM	P50440	423 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	COPB1	P53618	953 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	EIF5	P55010	431 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	RPS16	P62249	146 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	TXNL4A	P83876	142 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	CFHR3	Q02985	330 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	KCNB1	Q14721	858 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	CDC37	Q16543	378 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643		Q4G0T1	1027 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	DEF8	Q6ZN54	512 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	CCDC149	Q6ZUS6	474 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	C14orf80	Q86SX3	495 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	WDR63	Q8IWG1	891 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	C16orf71	Q8IYS4	520 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	NANOGP1	Q8N7R0	232 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	C16orf52	Q8NHV5	167 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	MAFA	Q8NHW3	353 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	CTHRC1	Q96CG8	243 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	COQ8B	Q96D53	544 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	ZDHHC12	Q96GR4	267 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	APIP	Q96GX9	242 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	HIC2	Q96JB3	615 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	MSLNL	Q96KJ4	702 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	NARF	Q9UHQ1	456 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	NOB1	Q9ULX3	412 aa	Known RBP	4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	KDM3B	Q7LBC6	1761 aa		4.03	□□□□□ -1.76
CDC27-213	ENST00000571643	LAMB4	A4D0S4	1761 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	USP42	Q9H9J4	1324 aa	Known RBP	4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	FCHO1	O14526	889 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SPRY2	O43597	315 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	TCEA3	O75764	348 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ZNF853	P0CG23	659 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	MYF5	P13349	255 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ADRA1D	P25100	572 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	RBL1	P28749	1068 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	TM4SF1	P30408	202 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	DDIT3	P35638	169 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	EIF4A1	P60842	406 aa	Known RBP	4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	HSF1	Q00613	529 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ID2	Q02363	134 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SLC39A6	Q13433	755 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SIM2	Q14190	667 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	RABEP1	Q15276	862 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	NPY5R	Q15761	445 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	GFOD2	Q3B7J2	385 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SHC4	Q6S5L8	630 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	MCM10	Q7L590	875 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	LIX1L	Q8IVB5	337 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SPICE1	Q8N0Z3	855 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ENAH	Q8N8S7	591 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	PNPLA1	Q8N8W4	532 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	PPHLN1	Q8NEY8	458 aa	Known RBP	4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ZBTB9	Q96C00	473 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	ERP27	Q96DN0	273 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	SELENOO	Q9BVL4	669 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	BTBD1	Q9H0C5	482 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	DNAJB11	Q9UBS4	358 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	TSPYL4	Q9UJ04	414 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	MID2	Q9UJV3	735 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	KIF13B	Q9NQT8	1826 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	COL15A1	P39059	1388 aa		4.02	□□□□□ -1.77
CDC27-213	ENST00000571643	RNF123	Q5XPI4	1314 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	RAB27B	O00194	218 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	APAF1	O14727	1248 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	PARP1	P09874	1014 aa	Known RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	FAM200B	P0CF97	657 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	GYS1	P13807	737 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	HOXB6	P17509	224 aa	Known RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	TACR3	P29371	465 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	CARS	P49589	748 aa	Known RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	RPS13	P62277	151 aa	Known RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	HTRA4	P83105	476 aa	Predicted RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	FMO1	Q01740	532 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	SRSF1	Q07955	248 aa	Known RBP eCLIP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	STK3	Q13188	491 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	PICALM	Q13492	652 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	GBX1	Q14549	363 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	LRRC41	Q15345	812 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	HSP90AB3P	Q58FF7	597 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	FAM133B	Q5BKY9	247 aa	Known RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	HYI	Q5T013	277 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	C10orf25	Q5T742	122 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	RANBP10	Q6VN20	620 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	CHST15	Q7LFX5	561 aa	Predicted RBP	4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	ANKRD23	Q86SG2	305 aa		4.01	□□□□□ -1.77
CDC27-213	ENST00000571643	ZSCAN30	Q86W11	494 aa		4.01	□□□□□ -1.77

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