RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TCP1P17987 556 aaKnown RBP24.13■■□□□ 1.45
RAB40C-212ENST00000569575 GJA4P35212 333 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 NDST2P52849 883 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 CDH18Q13634 790 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 SPOCD1Q6ZMY3 1216 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 CCDC50Q8IVM0 306 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 MFN1Q8IWA4 741 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 UMODL1-AS1Q8N2C9 162 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 TRAF3IP1Q8TDR0 691 aaPredicted RBP24.13■■□□□ 1.45
RAB40C-212ENST00000569575 ALG3Q92685 438 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 NAPGQ99747 312 aaPredicted RBP24.13■■□□□ 1.45
RAB40C-212ENST00000569575 ARHGEF4Q9NR80 690 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 GTSE1Q9NYZ3 720 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 NEU3Q9UQ49 428 aa24.13■■□□□ 1.45
RAB40C-212ENST00000569575 ILVBLA1L0T0 632 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 H0Y626 953 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 MAN2B1O00754 1011 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 TJP3O95049 919 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 ERCC2P18074 760 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 OR1E1P30953 314 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 PRKCQQ04759 706 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 TNK2Q07912 1038 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 SEL1L2Q5TEA6 688 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 PAPD7Q5XG87 772 aaKnown RBP24.12■■□□□ 1.45
RAB40C-212ENST00000569575 TMCO3Q6UWJ1 677 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 ETFBKMTQ8IXQ9 262 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.12■■□□□ 1.451e-6■■■□□ 14.6
RAB40C-212ENST00000569575 CCDC26Q8TAB7 109 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 MAIP1Q8WWC4 291 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 RNF25Q96BH1 459 aaPredicted RBP24.12■■□□□ 1.45
RAB40C-212ENST00000569575 SHDQ96IW2 340 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 MAGEH1Q9H213 219 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 DEC1Q9P2X7 70 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 ZNF212Q9UDV6 495 aa24.12■■□□□ 1.45
RAB40C-212ENST00000569575 PACSIN2Q9UNF0 486 aaPredicted RBP24.12■■□□□ 1.45
RAB40C-212ENST00000569575 TRDMT1O14717 391 aaKnown RBP24.11■■□□□ 1.45
RAB40C-212ENST00000569575 NCAM2O15394 837 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 TIMM44O43615 452 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 ZNF189O75820 626 aaPredicted RBP24.11■■□□□ 1.45
RAB40C-212ENST00000569575 MARCKSL1P49006 195 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 NR2C2P49116 596 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 PLK1P53350 603 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 VCPP55072 806 aaKnown RBP24.11■■□□□ 1.45
RAB40C-212ENST00000569575 SLC9A4Q6AI14 798 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 MFSD7Q6UXD7 560 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 CFAP52Q8N1V2 620 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 WFIKKN2Q8TEU8 576 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 MAGEB5Q9BZ81 275 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 MPP6Q9NZW5 540 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 SNX10Q9Y5X0 201 aa24.11■■□□□ 1.45
RAB40C-212ENST00000569575 TCF20Q9UGU0 1960 aaKnown RBP24.11■■□□□ 1.45
RAB40C-212ENST00000569575 hCG_1818297A0A087WSY0 165 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 A0A0A0MRY4 1105 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 KCNK3O14649 394 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 DCLK1O15075 740 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 CD48P09326 243 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 PYGMP11217 842 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 GGCXP38435 758 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 PAFAH1B3Q15102 231 aaKnown RBP24.1■■□□□ 1.45
RAB40C-212ENST00000569575 PARP15Q460N3 678 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 ALFQ53S48 1182 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 KIAA0907Q7Z7F0 614 aaPredicted RBP24.1■■□□□ 1.45
RAB40C-212ENST00000569575 ST13P5Q8NFI4 369 aaPredicted RBP24.1■■□□□ 1.45
RAB40C-212ENST00000569575 PCDH19Q8TAB3 1148 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 PNKPQ96T60 521 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 NAP1L3Q99457 506 aaPredicted RBP24.1■■□□□ 1.45
RAB40C-212ENST00000569575 OSBPL8Q9BZF1 889 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 RNF14Q9UBS8 474 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 TTC7AQ9ULT0 858 aaPredicted RBP24.1■■□□□ 1.45
RAB40C-212ENST00000569575 SNX12Q9UMY4 172 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 MYOFQ9NZM1 2061 aa24.1■■□□□ 1.45
RAB40C-212ENST00000569575 OTOL1A6NHN0 477 aaPredicted RBP24.09■■□□□ 1.45
RAB40C-212ENST00000569575 APOL1O14791 398 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 TULP3O75386 442 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 CNTN5O94779 1100 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 TGM2P21980 687 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 CASQ1P31415 396 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 DGKGP49619 791 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 SULT2A1Q06520 285 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 EIF4HQ15056 248 aaKnown RBP24.09■■□□□ 1.45
RAB40C-212ENST00000569575 GAB4Q2WGN9 574 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 SLC44A4Q53GD3 710 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 BBS12Q6ZW61 710 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 C17orf53Q8N3J3 647 aaPredicted RBP24.09■■□□□ 1.45
RAB40C-212ENST00000569575 CARNMT1Q8N4J0 409 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 TTC13Q8NBP0 860 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 MYEOVQ96EZ4 313 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 WDR24Q96S15 920 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 NELL2Q99435 816 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 BRD8Q9H0E9 1235 aa24.09■■□□□ 1.45
RAB40C-212ENST00000569575 TICRRQ7Z2Z1 1910 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 SPECC1L-ADORA2AF8WAN1 911 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 PI4K2BG5E9Z4 385 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 RAMP2O60895 175 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 AMPD1P23109 780 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 CTHP32929 405 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 GRIA2P42262 883 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 SGSHP51688 502 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 ZNF33AQ06730 810 aa24.08■■□□□ 1.45
RAB40C-212ENST00000569575 GRAMD4Q6IC98 578 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms