RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	ERVW-1	Q9UQF0	538 aa		10.7	□□□□□ -0.7
UBR1-207	ENST00000568782	SIK3	Q9Y2K2	1263 aa		10.7	□□□□□ -0.7
UBR1-207	ENST00000568782	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.7	□□□□□ -0.7
UBR1-207	ENST00000568782	TNRC6B	Q9UPQ9	1833 aa	Known RBP	10.7	□□□□□ -0.7
UBR1-207	ENST00000568782	ADAMTS9	Q9P2N4	1935 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	EDDM13	A0A1B0GTR0	161 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	TARSL2	A2RTX5	802 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	DCDC2B	A2VCK2	349 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	GDF9	O60383	454 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PAGE1	O75459	146 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	KRT3	P12035	628 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	TNFAIP3	P21580	790 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	ITPKA	P23677	461 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SDC4	P31431	198 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	RDX	P35241	583 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PTGER3	P43115	390 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	CXCR3	P49682	368 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	CDH4	P55283	916 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	JAM2	P57087	298 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PITX1	P78337	314 aa	Predicted RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	KLHL40	Q2TBA0	621 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SKOR2	Q2VWA4	1001 aa	Predicted RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PLEKHG6	Q3KR16	790 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	ACCSL	Q4AC99	568 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	DPY19L2P1	Q6NXN4	242 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	FBXL22	Q6P050	247 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC23A3	Q6PIS1	610 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	MMS22L	Q6ZRQ5	1243 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	DSG4	Q86SJ6	1040 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	CACUL1	Q86Y37	369 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	HDDC3	Q8N4P3	179 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	CADM4	Q8NFZ8	388 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PGAP3	Q96FM1	320 aa	Predicted RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	TOE1	Q96GM8	510 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	ZNF419	Q96HQ0	510 aa	Predicted RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	C1orf74	Q96LT6	269 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	CCDC114	Q96M63	670 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	TBCB	Q99426	244 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	OMD	Q99983	421 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	BTBD1	Q9H0C5	482 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	MUC3B	Q9H195	1237 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PCED1A	Q9H1Q7	454 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC6A17	Q9H1V8	727 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SMOC1	Q9H4F8	434 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PRSS16	Q9NQE7	514 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	METTL5	Q9NRN9	209 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	WSB2	Q9NYS7	404 aa	Predicted RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	USP36	Q9P275	1121 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	XPO7	Q9UIA9	1087 aa	Known RBP	10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	VPS28	Q9UK41	221 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	PILRB	Q9UKJ0	227 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC6A14	Q9UN76	642 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	GPR179	Q6PRD1	2367 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	SPTBN4	Q9H254	2564 aa		10.69	□□□□□ -0.7
UBR1-207	ENST00000568782	DOCK4	Q8N1I0	1966 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	DMXL1	Q9Y485	3027 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SRGAP2	O75044	1071 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	CYP1A1	P04798	512 aa	Predicted RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	TPM3	P06753	285 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	RHOC	P08134	193 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SERPINF2	P08697	491 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	PDGFRA	P16234	1089 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	MMP8	P22894	467 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	IRX4	P78413	519 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	ATP11A	P98196	1134 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	FMO1	Q01740	532 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	CCDC15	Q0P6D6	951 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	EIF4EBP2	Q13542	120 aa	Predicted RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	NCAPH	Q15003	741 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	PTPRN	Q16849	979 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	CDO1	Q16878	200 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	HNRNPA1L2	Q32P51	320 aa	Known RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	UAP1L1	Q3KQV9	507 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	FSCB	Q5H9T9	825 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	C6orf118	Q5T5N4	469 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	TCEAL6	Q6IPX3	200 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	FAM124A	Q86V42	546 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	DHX40	Q8IX18	779 aa	Known RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	ZNF366	Q8N895	744 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC30A5	Q8TAD4	765 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	WFDC5	Q8TCV5	224 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC20A1	Q8WUM9	679 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SNX19	Q92543	992 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	TCEAL3	Q969E4	200 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	P2RY11	Q96G91	374 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	CFAP57	Q96MR6	1250 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	HAPLN3	Q96S86	360 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	PRMT1	Q99873	361 aa	Known RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	AGPAT1	Q99943	283 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	C11orf70	Q9BRQ4	267 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	GTPBP2	Q9BX10	602 aa	Known RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	MIR1-1HG	Q9H1L0	117 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SLC32A1	Q9H598	525 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	SGK2	Q9HBY8	427 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	PIGV	Q9NUD9	493 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	ARHGEF38	Q9NXL2	777 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	NOCT	Q9UK39	431 aa	Known RBP	10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	MYO6	Q9UM54	1294 aa		10.68	□□□□□ -0.7
UBR1-207	ENST00000568782	HS3ST4	Q9Y661	456 aa		10.68	□□□□□ -0.7

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