RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 FZD10Q9ULW2 581 aa12.46□□□□□ -0.41
TMEM170A-205ENST00000568559 SHOC2Q9UQ13 582 aa12.46□□□□□ -0.41
TMEM170A-205ENST00000568559 KRT38O76015 456 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 PITX1P78337 314 aaPredicted RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 PRAMEP78395 509 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 MTA1Q13330 715 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 NOMO1Q15155 1222 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 KREMEN2Q8NCW0 462 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 ATP13A1Q9HD20 1204 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 ARHGEF4Q9NR80 690 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 ZFATQ9P243 1243 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 YIPF1Q9Y548 306 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 RBBP6Q7Z6E9 1792 aaKnown RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 MEFVO15553 781 aaPredicted RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 OPHN1O60890 802 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 CASP2P42575 452 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 WDR5P61964 334 aaKnown RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 RAD51Q06609 339 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 SMYD5Q6GMV2 418 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 CFAP52Q8N1V2 620 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 EFHBQ8N7U6 833 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 CASP10Q92851 521 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 BTN2A3PQ96KV6 586 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 FRMD8Q9BZ67 464 aaPredicted RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 UNKQ9C0B0 810 aaKnown RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 UBE2OQ9C0C9 1292 aaKnown RBP12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 STK39Q9UEW8 545 aa12.46□□□□□ -0.42
TMEM170A-205ENST00000568559 TRAV19A0A0A6YYK7 116 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 L1CAMP32004 1257 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 FAM189BP81408 668 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 SETDB1Q15047 1291 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 ANKRD20A2Q5SQ80 823 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 ANKRD20A1Q5TYW2 823 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 ANKRD20A3Q5VUR7 823 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 SDCCAG8Q86SQ7 713 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 TOP1MTQ969P6 601 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 STAMBPL1Q96FJ0 436 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 PWWP2AQ96N64 755 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 SLC9A7Q96T83 725 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 RAD9AQ99638 391 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 BRD8Q9H0E9 1235 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 TLE6Q9H808 572 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 PRDM16Q9HAZ2 1276 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 NENFQ9UMX5 172 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 MRPS23Q9Y3D9 190 aaKnown RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 BRWD1Q9NSI6 2320 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 STAMBPO95630 424 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 HAPLN1P10915 354 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 LIG3P49916 1009 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 MAP7D1Q3KQU3 841 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 LRIG3Q6UXM1 1119 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 DNAJB7Q7Z6W7 309 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 PSTKQ8IV42 348 aaKnown RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 KLHL23Q8NBE8 558 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 PEBP4Q96S96 227 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 MAGEB5Q9BZ81 275 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 VPS11Q9H270 941 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 TLK1Q9UKI8 766 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 AAR2Q9Y312 384 aaKnown RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 RWDD3Q9Y3V2 267 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 TRPM7Q96QT4 1865 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 IRAK2O43187 625 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 MFSD11O43934 449 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 SOX11P35716 441 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 RENBPP51606 427 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 FAM43BQ6ZT52 329 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 CMTR2Q8IYT2 770 aaKnown RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 NPY6RQ99463 290 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 C11orf84Q9BUA3 381 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 PNPLA8Q9NP80 782 aa12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 RCOR3Q9P2K3 495 aaPredicted RBP12.45□□□□□ -0.42
TMEM170A-205ENST00000568559 CDH16O75309 829 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 USP12O75317 370 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 BRAFP15056 766 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 GEMP55040 296 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SESN3P58005 492 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 DSC1Q08554 894 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 RAB6CQ53S08 254 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 RASSF3Q86WH2 238 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 NDUFAF2Q8N183 169 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 PPHLN1Q8NEY8 458 aaKnown RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ZNF669Q96BR6 464 aaPredicted RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 RAB6CQ9H0N0 254 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 CCSER2Q9H7U1 834 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 A0A0A0MRY4 1105 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 AP3B1O00203 1094 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 ZBTB24O43167 697 aaPredicted RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 HSPA9P38646 679 aaKnown RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 NSUN2Q08J23 767 aaKnown RBP eCLIP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 DPYSL2Q16555 572 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 RFWD3Q6PCD5 774 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 TTC9BQ8N6N2 239 aa12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
TMEM170A-205ENST00000568559 SPATA13Q96N96 652 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms