RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 NR6A1Q15406 480 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DNAJC14Q6Y2X3 702 aaPredicted RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TMEM26Q6ZUK4 368 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 SNX31Q8N9S9 440 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 VPS37AQ8NEZ2 397 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ADCY4Q8NFM4 1077 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 LPAR1Q92633 364 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PCDHB18PQ96TA0 734 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 IPPQ9Y573 584 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 NBNO60934 754 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TNFRSF21O75509 655 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ITGA2BP08514 1039 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 GRIK1P39086 918 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 HK2P52789 917 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 AQP4P55087 323 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 RAD51Q06609 339 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TMEM62Q0P6H9 643 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 CDC16Q13042 620 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 SPANXN3Q5MJ09 141 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 CDH24Q86UP0 819 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 ITFG1Q8TB96 612 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 COX4I2Q96KJ9 171 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 DPP3Q9NY33 737 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 TRMT6Q9UJA5 497 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 KIAA1257Q9ULG3 409 aa12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 PRPF19Q9UMS4 504 aaKnown RBP12.65□□□□□ -0.38
CSPG4P13-202ENST00000567704 LOC100506127A0A0U1RQW1 187 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 TBKBP1A7MCY6 615 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 ADSSP30520 456 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 GJA8P48165 433 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CSE1LP55060 971 aaKnown RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CDH8P55286 799 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SNX17Q15036 470 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 MTX3Q5HYI7 312 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 WDR49Q8IV35 697 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CYP4X1Q8N118 509 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 L3MBTL3Q96JM7 780 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 TUBGCP5Q96RT8 1024 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 POMKQ9H5K3 350 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 MPP6Q9NZW5 540 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 ADRB2P07550 413 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 ITPK1Q13572 414 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPDYE7PQ495Y7 208 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 VSTM1Q6UX27 236 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 C10orf107Q8IVU9 208 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 FAM126BQ8IXS8 530 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SMAD5Q99717 465 aaKnown RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CDH22Q9UJ99 828 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 ARIH1Q9Y4X5 557 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 MAGEB16A2A368 324 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 VWA5AO00534 786 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 BIRC5O15392 142 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 TGFB1I1O43294 461 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 BPGMP07738 259 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 PTGIRP43119 386 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 DDR2Q16832 855 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 DNAAF2Q9NVR5 837 aaKnown RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 WWOXQ9NZC7 414 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 hCG_1818297A0A087WSY0 165 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 NUMBP49757 651 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 LRRC38Q5VT99 294 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 PARP8Q8N3A8 854 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 VGLL2Q8N8G2 317 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 ST13P5Q8NFI4 369 aaPredicted RBP12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 LRRN4Q8WUT4 740 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 TCF12Q99081 682 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 TBCBQ99426 244 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CIB1Q99828 191 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SYT15Q9BQS2 421 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 PREBQ9HCU5 417 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 SPAG4Q9NPE6 437 aa12.64□□□□□ -0.39
CSPG4P13-202ENST00000567704 CCDC154A6NI56 674 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 SNRPB2P08579 225 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 MYL3P08590 195 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TSHRP16473 764 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ACO1P21399 889 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 RECQLP46063 649 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 PRIM2P49643 509 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 DDX39BQ13838 428 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 PDZK1Q5T2W1 519 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 STRIP1Q5VSL9 837 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ERLEC1Q96DZ1 483 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 SMARCAD1Q9H4L7 1026 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 STN1Q9H668 368 aaKnown RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 H2AFY2Q9P0M6 372 aaPredicted RBP12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 KLHL3Q9UH77 587 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 S100A1P23297 94 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 GRIA4P48058 902 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 EVX2Q03828 476 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 FSTL1Q12841 308 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 CDH17Q12864 832 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 KLF10Q13118 480 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 TTC23Q5W5X9 447 aa12.63□□□□□ -0.39
CSPG4P13-202ENST00000567704 ZNF470Q6ECI4 717 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms