RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 DCAKDQ8WVC6 231 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 CKAP2Q8WWK9 683 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 CASD1Q96PB1 797 aa23.89■■□□□ 1.41
LINC00543-201ENST00000567234 ELAC2Q9BQ52 826 aaKnown RBP23.89■■□□□ 1.41
LINC00543-201ENST00000567234 ZC3H7BQ9UGR2 993 aaKnown RBP23.89■■□□□ 1.41
LINC00543-201ENST00000567234 SCN5AQ14524 2016 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 PPIDQ08752 370 aaKnown RBP23.88■■□□□ 1.41
LINC00543-201ENST00000567234 WASHC5Q12768 1159 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 SYCP2LQ5T4T6 812 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 RNF34Q969K3 372 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 KLHL29Q96CT2 875 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 HDAC11Q96DB2 347 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 SIGLEC10Q96LC7 697 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 FBXO44Q9H4M3 255 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 ABI2Q9NYB9 513 aaPredicted RBP23.88■■□□□ 1.41
LINC00543-201ENST00000567234 SCML2Q9UQR0 700 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 PCDHB5Q9Y5E4 795 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 NUP205Q92621 2012 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 TET1Q8NFU7 2136 aa23.88■■□□□ 1.41
LINC00543-201ENST00000567234 ALDH2P05091 517 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 VIMP08670 466 aaKnown RBP23.87■■□□□ 1.41
LINC00543-201ENST00000567234 OR4Q2P0C623 313 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 MTM1Q13496 603 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 SPDYAQ5MJ70 313 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 RNF43Q68DV7 783 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 DENND5BQ6ZUT9 1274 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 NUP93Q8N1F7 819 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 ANKRD42Q8N9B4 389 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 SLC44A1Q8WWI5 657 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 PAWRQ96IZ0 340 aaKnown RBP23.87■■□□□ 1.41
LINC00543-201ENST00000567234 LRFN2Q9ULH4 789 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 LRRC42Q9Y546 428 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 TANC1Q9C0D5 1861 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 LRIG2O94898 1065 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 UBOX5O94941 541 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 MRPS35P82673 323 aaKnown RBP23.87■■□□□ 1.41
LINC00543-201ENST00000567234 ZNF33AQ06730 810 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 GALNT2Q10471 571 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 PPP2R5DQ14738 602 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 EFTUD2Q15029 972 aaKnown RBP eCLIP23.87■■□□□ 1.41
LINC00543-201ENST00000567234 ZNF280DQ6N043 979 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 SCD5Q86SK9 330 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 MON1AQ86VX9 555 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 MFN1Q8IWA4 741 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 SCN4BQ8IWT1 228 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 ARHGAP18Q8N392 663 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 EBNA1BP2Q99848 306 aaKnown RBP23.87■■□□□ 1.41
LINC00543-201ENST00000567234 MCOLN1Q9GZU1 580 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 IKBKGQ9Y6K9 419 aa23.87■■□□□ 1.41
LINC00543-201ENST00000567234 DIAPH2O60879 1101 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 SNUPNO95149 360 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 PARNO95453 639 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 NEFHP12036 1026 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 FGFR3P22607 806 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 PRKCHP24723 683 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 EPHB2P29323 1055 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 CCR1P32246 355 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 IFNAR2P48551 515 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 TLE2Q04725 743 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 FAAP100Q0VG06 881 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ELAVL2Q12926 359 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 LBRQ14739 615 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 CTXN3Q4LDR2 81 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 CYS1Q717R9 158 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ZNF567Q8N184 647 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 CRIPAKQ8N1N5 446 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 MGARPQ8TDB4 240 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 MZB1Q8WU39 189 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ZFAND2BQ8WV99 257 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ALKBH8Q96BT7 664 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 TMEM175Q9BSA9 504 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 MRPL9Q9BYD2 267 aaKnown RBP23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ETAA1Q9NY74 926 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 ZFATQ9P243 1243 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 PCDH10Q9P2E7 1040 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 TTLL3Q9Y4R7 772 aa23.86■■□□□ 1.41
LINC00543-201ENST00000567234 IQANK1A0A1B0GTG1 560 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 C1QAP02745 245 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 SMARCB1Q12824 385 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 LRRC14Q15048 493 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 KBTBD12Q3ZCT8 623 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 FAM171A1Q5VUB5 890 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 LRRC8BQ6P9F7 803 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 ANKRD33Q7Z3H0 272 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 NPAS4Q8IUM7 802 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 DENND1AQ8TEH3 1009 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 MAGEB18Q96M61 343 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 VAT1Q99536 393 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 OXCT2Q9BYC2 517 aaPredicted RBP23.85■■□□□ 1.41
LINC00543-201ENST00000567234 TXLNGQ9NUQ3 528 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 IL37Q9NZH6 218 aa23.85■■□□□ 1.41
LINC00543-201ENST00000567234 APOEP02649 317 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 HOXC13P31276 330 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 IL9RQ01113 521 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 MSANTD2Q6P1R3 559 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 CCNJLQ8IV13 435 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 NPWQ8N729 165 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 CFAP36Q96G28 342 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 ABCF3Q9NUQ8 709 aa23.84■■□□□ 1.41
LINC00543-201ENST00000567234 CPSF2Q9P2I0 782 aaKnown RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms