RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CPQQ9Y646 472 aa18.19■□□□□ 0.5
HERC2-208ENST00000566635 HDCP19113 662 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
HERC2-208ENST00000566635 RNASEH2BQ5TBB1 312 aaKnown RBP18.18■□□□□ 0.5
HERC2-208ENST00000566635 ARHGAP36Q6ZRI8 547 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 TMC3Q7Z5M5 1100 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 ADAMTS19Q8TE59 1207 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 TCEAL4Q96EI5 215 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 P2RY11Q96G91 374 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 GCNAQ96QF7 691 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 SEPT10Q9P0V9 454 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 DNMT3BQ9UBC3 853 aaKnown RBP18.18■□□□□ 0.5
HERC2-208ENST00000566635 PPARGC1AQ9UBK2 798 aaKnown RBP18.18■□□□□ 0.5
HERC2-208ENST00000566635 MTRF1LQ9UGC7 380 aaKnown RBP18.18■□□□□ 0.5
HERC2-208ENST00000566635 RAD54BQ9Y620 910 aa18.18■□□□□ 0.5
HERC2-208ENST00000566635 NOTCH4Q99466 2003 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 DFFAO00273 331 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 RFXAPO00287 272 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 TRDMT1O14717 391 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 MAP2K7O14733 419 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 CKMP06732 381 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 CDC25CP30307 473 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 GARSP41250 739 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 DHX9Q08211 1270 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 FAXCQ5TGI0 409 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 ANKRD22Q5VYY1 191 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 LGI2Q8N0V4 545 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 BBOF1Q8ND07 529 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 SHKBP1Q8TBC3 707 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 CPT1BQ92523 772 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 DNAJC17Q9NVM6 304 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 FARP1Q9Y4F1 1045 aaPredicted RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 F5H5T6 163 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 RHOQP17081 205 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 HSPA9P38646 679 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 SLC11A2P49281 568 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 NTHL1P78549 312 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 BASP1P80723 227 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 PPIDQ08752 370 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 CCDC25Q86WR0 208 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 TTC16Q8NEE8 873 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 HDAC11Q96DB2 347 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 PRICKLE1Q96MT3 831 aaPredicted RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 SLC39A8Q9C0K1 460 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 NOL6Q9H6R4 1146 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 PAK5Q9P286 719 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 AGO1Q9UL18 857 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 HPCAL4Q9UM19 191 aa18.17■□□□□ 0.5
HERC2-208ENST00000566635 HELZP42694 1942 aaKnown RBP18.17■□□□□ 0.5
HERC2-208ENST00000566635 CLUHO75153 1309 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 TCRBV7S3A2A0A539 114 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 WASH4PA8MWX3 477 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 KCNK1O00180 336 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 RNF103O00237 685 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 C1RP00736 705 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 MX2P20592 715 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 EPHA5P54756 1037 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 GAD2Q05329 585 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SLC5A9Q2M3M2 681 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SYCP2LQ5T4T6 812 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 RTL10Q7L3V2 364 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 CFAP52Q8N1V2 620 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 MREGQ8N565 214 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 PRCCQ92733 491 aaPredicted RBP18.16■□□□□ 0.5
HERC2-208ENST00000566635 TXLNGYQ9BZA5 131 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 FAM129AQ9BZQ8 928 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 TMEM248Q9NWD8 314 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 ZNF212Q9UDV6 495 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 ATP8A1Q9Y2Q0 1164 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SPDYE4A6NLX3 237 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 DRGXA6NNA5 263 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 F5H423 210 aaPredicted RBP18.16■□□□□ 0.5
HERC2-208ENST00000566635 NCAM2O15394 837 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 MOSPD3O75425 235 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 GCATO75600 419 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 RHOP08100 348 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 PTPN2P17706 415 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 HOXA9P31269 272 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 ACTN2P35609 894 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 NRIP1P48552 1158 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SGSHP51688 502 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 CAV1Q03135 178 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 WASHC5Q12768 1159 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 MTA1Q13330 715 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 AFMIDQ63HM1 303 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 SMG9Q9H0W8 520 aaKnown RBP18.16■□□□□ 0.5
HERC2-208ENST00000566635 TLE6Q9H808 572 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 RAB6BQ9NRW1 208 aa18.16■□□□□ 0.5
HERC2-208ENST00000566635 TRAV19A0A0A6YYK7 116 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 C5orf60A6NFR6 353 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 PPFIA2O75334 1257 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 TMEM63AO94886 807 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 METTL18O95568 372 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 MORF4L2Q15014 288 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 TEAD2Q15562 447 aa18.15■□□□□ 0.5
HERC2-208ENST00000566635 UAP1Q16222 522 aaPredicted RBP18.15■□□□□ 0.5
HERC2-208ENST00000566635 UBAP2Q5T6F2 1119 aaKnown RBP18.15■□□□□ 0.5
HERC2-208ENST00000566635 LZTR1Q8N653 840 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms