RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ACADMP11310 421 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 GABRG2P18507 467 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PRKCHP24723 683 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 MZF1P28698 734 aaPredicted RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 OR1E1P30953 314 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 EIF4A3P38919 411 aaKnown RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 PRKCIP41743 596 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 DHPSP49366 369 aaPredicted RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 STK19P49842 368 aaPredicted RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 EIF4HQ15056 248 aaKnown RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 ALFQ53S48 1182 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PITRM1Q5JRX3 1037 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 MPP7Q5T2T1 576 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PPP1R2P3Q6NXS1 205 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 ADIPOR2Q86V24 386 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 FAM124AQ86V42 546 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 KIAA2013Q8IYS2 634 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 CCDC185Q8N715 623 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 ZNF557Q8N988 423 aaPredicted RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 KCNV2Q8TDN2 545 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 IQCDQ96DY2 449 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 SPACA7Q96KW9 195 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PRMT1Q99873 361 aaKnown RBP10.43□□□□□ -0.74
HERC1-212ENST00000561348 MAGEB5Q9BZ81 275 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 SEMA4AQ9H3S1 761 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 ARHGEF38Q9NXL2 777 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 PCSK1NQ9UHG2 260 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 VPS28Q9UK41 221 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 USP18Q9UMW8 372 aa10.43□□□□□ -0.74
HERC1-212ENST00000561348 ITIH6Q6UXX5 1313 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 A0A087X0T9 212 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 A0A1W2PQF6 199 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 I6L893 689 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 AKR1B10O60218 316 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 LILRB5O75023 590 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 RNF8O76064 485 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 DLDP09622 509 aaKnown RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 FAM228BP0C875 321 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 NDUFV2P19404 249 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 BCKDHBP21953 392 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 CNR2P34972 360 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 ADRA1BP35368 520 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 NNMTP40261 264 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 PTPN9P43378 593 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 ZNF143P52747 638 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 HDAC4P56524 1084 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 CREB5Q02930 508 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 GFPT1Q06210 699 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 SPEM2Q0P670 501 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 MTA1Q13330 715 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 MAMLD1Q13495 774 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 EIF4EBP2Q13542 120 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 TRIM14Q14142 442 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 E2F5Q15329 346 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 ELF2Q15723 593 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 EFHC2Q5JST6 749 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 TTC39BQ5VTQ0 682 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 SLFN11Q7Z7L1 901 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 TMPRSS6Q8IU80 811 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 VSTM4Q8IW00 320 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 TMEFF1Q8IYR6 380 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 SUMF1Q8NBK3 374 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 OR8K1Q8NGG5 319 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 RUBCNQ92622 972 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 NELL1Q92832 810 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 NT5C3BQ969T7 300 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 PGAP3Q96FM1 320 aaPredicted RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 GABRG3Q99928 467 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 CNPY3Q9BT09 278 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 TRIM7Q9C029 511 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 EPC1Q9H2F5 836 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 ARRDC1-AS1Q9H2J1 176 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 PRDM16Q9HAZ2 1276 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 GPATCH2LQ9NWQ4 482 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 OR12D3Q9UGF7 316 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 DNAI1Q9UI46 699 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 INTS6Q9UL03 887 aaKnown RBP10.42□□□□□ -0.74
HERC1-212ENST00000561348 ERVW-1Q9UQF0 538 aa10.42□□□□□ -0.74
HERC1-212ENST00000561348 TMEM110-MUSTN1A8MSY1 372 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 TTC34A8MYJ7 566 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 PROB1E7EW31 1015 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 CBX4O00257 560 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 GFRA2O00451 464 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 NDUFS2O75306 463 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 CLDN11O75508 207 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 ENDOD1O94919 500 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 GZMAP12544 262 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 HOXA6P31267 233 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 GJC1P36383 396 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 DNA2P51530 1060 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 CDH4P55283 916 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 ECT2LQ008S8 904 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 OGDHQ02218 1023 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 RPL6Q02878 288 aaKnown RBP10.41□□□□□ -0.74
HERC1-212ENST00000561348 BYSLQ13895 437 aaKnown RBP10.41□□□□□ -0.74
HERC1-212ENST00000561348 PLEKHG6Q3KR16 790 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 DAB2IPQ5VWQ8 1189 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 HGSNATQ68CP4 663 aa10.41□□□□□ -0.74
HERC1-212ENST00000561348 IL31Q6EBC2 164 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms