RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 GTF2A2P52657 109 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 GBE1Q04446 702 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 TMEM126BQ8IUX1 230 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 SLC7A3Q8WY07 619 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 BIRC8Q96P09 236 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 TWNKQ96RR1 684 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 CIB1Q99828 191 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 MAGEB5Q9BZ81 275 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 DEFB129Q9H1M3 183 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 SYNPO2Q9UMS6 1093 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 SNX13Q9Y5W8 968 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 BCLAF3A2AJT9 711 aaKnown RBP16.87■□□□□ 0.29
TPM1-228ENST00000560975 BCAS2O75934 225 aaPredicted RBP16.87■□□□□ 0.29
TPM1-228ENST00000560975 LTFP02788 710 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 OATP04181 439 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 PSAPP07602 524 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 ZNF143P52747 638 aaPredicted RBP16.87■□□□□ 0.29
TPM1-228ENST00000560975 NUP107P57740 925 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 IRF9Q00978 393 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 NIPAL4Q0D2K0 466 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 IKBKEQ14164 716 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 STRIP1Q5VSL9 837 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 BRSK2Q8IWQ3 736 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 LZTR1Q8N653 840 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 CEP41Q9BYV8 373 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 ARMC7Q9H6L4 198 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 CAB39LQ9H9S4 337 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 SNX15Q9NRS6 342 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 OLAHQ9NV23 265 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 CDC14AQ9UNH5 594 aa16.87■□□□□ 0.29
TPM1-228ENST00000560975 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
TPM1-228ENST00000560975 MAGEA6P43360 314 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 PHKA2P46019 1235 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 CREB5Q02930 508 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 DLG2Q15700 870 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 DUOXA2Q1HG44 320 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 EML3Q32P44 896 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 PCDH20Q8N6Y1 951 aaKnown RBP16.86■□□□□ 0.29
TPM1-228ENST00000560975 HES2Q9Y543 173 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.86■□□□□ 0.29
TPM1-228ENST00000560975 MED7O43513 233 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 MICAL2O94851 1124 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 VAPBO95292 243 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 CTBSQ01459 385 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 MTX3Q5HYI7 312 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 GPR141Q7Z602 305 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 WDR49Q8IV35 697 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 PGAM4Q8N0Y7 254 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 RP9Q8TA86 221 aaKnown RBP16.86■□□□□ 0.29
TPM1-228ENST00000560975 C12orf43Q96C57 262 aaKnown RBP16.86■□□□□ 0.29
TPM1-228ENST00000560975 ISOC1Q96CN7 298 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 CNPY3Q9BT09 278 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 WDR37Q9Y2I8 494 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 ADGRA2Q96PE1 1338 aa16.86■□□□□ 0.29
TPM1-228ENST00000560975 KANSL1LA0AUZ9 987 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 NPM3O75607 178 aaKnown RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 RAD17O75943 681 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 PHEXP78562 749 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 RELAQ04206 551 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 DCLK2Q8N568 766 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 DLG3Q92796 817 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 SLC35B4Q969S0 331 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 LHX5Q9H2C1 402 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 AP4S1Q9Y587 144 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 PSMD12O00232 456 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 ACOT8O14734 319 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 SEC24DO94855 1032 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 PGGT1BP53609 377 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 TXNL4AP83876 142 aaKnown RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 MTA1Q13330 715 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 METTL21CQ5VZV1 264 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 OGFOD2Q6N063 350 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 CYP2R1Q6VVX0 501 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 CDR2LQ86X02 465 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 CARM1Q86X55 608 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 FAM47BQ8NA70 645 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 THAP11Q96EK4 314 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 MCRS1Q96EZ8 462 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 MRIQ9BWK5 157 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 GATA5Q9BWX5 397 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 ZNF341Q9BYN7 854 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 TBC1D23Q9NUY8 699 aa16.85■□□□□ 0.29
TPM1-228ENST00000560975 MAGED2Q9UNF1 606 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.85■□□□□ 0.29
TPM1-228ENST00000560975 CBFA2T3O75081 653 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 CKMT2P17540 419 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 TGM2P21980 687 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 RXRGP48443 463 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 CLCN2P51788 898 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ACTR2P61160 394 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 GSTM4Q03013 218 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 ATP1A4Q13733 1029 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 PTK2BQ14289 1009 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 TGFBIQ15582 683 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 VPS72Q15906 364 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 XKR5Q6UX68 686 aa16.84■□□□□ 0.29
TPM1-228ENST00000560975 FIBCD1Q8N539 461 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms