RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 MILR1Q7Z6M3 343 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SEMA6AQ9H2E6 1030 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ARMC7Q9H6L4 198 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ARHGEF3Q9NR81 526 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SMIM31A0A1B0GVY4 71 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 SLITRK3O94933 977 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 RPLP2P05387 115 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 DNAJB2P25686 324 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SPANXN2Q5MJ10 180 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 PLEKHH3Q7Z736 793 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ZDHHC13Q8IUH4 622 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 CKAP2Q8WWK9 683 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 TRIM63Q969Q1 353 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 PCDHGC5Q9Y5F6 944 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 PPLO60437 1756 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 CD3EAPO15446 510 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 ANXA6P08133 673 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ALOX12P18054 663 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 GSSP48637 474 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 RPL14P50914 215 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 GTF2A2P52657 109 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ITGA1P56199 1179 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 TBX4P57082 545 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SFSWAPQ12872 951 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 ZNF57Q68EA5 555 aaPredicted RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 ENKURQ8TC29 256 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 CLEC4MQ9H2X3 399 aaPredicted RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 NOL6Q9H6R4 1146 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 MAN1C1Q9NR34 630 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYNM-203ENST00000560674 TRIM43BA6NCK2 446 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 CASTOR2A6NHX0 329 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 MAP2K7O14733 419 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 VIL1P09327 827 aaKnown RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 MIPP30301 263 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 NEK3P51956 506 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 FCGRTP55899 365 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 MTA1Q13330 715 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 BFSP2Q13515 415 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 TFAP2DQ7Z6R9 452 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 BHLHE22Q8NFJ8 381 aaPredicted RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 PYDC1Q8WXC3 89 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 CDHR5Q9HBB8 845 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 A0A087X0B3 334 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 PTGES3LE9PB15 166 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SPTLC1O15269 473 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 LTFP02788 710 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 TUBP50607 506 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SLC6A3Q01959 620 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 KRT73Q86Y46 540 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 SERAC1Q96JX3 654 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 OSMRQ99650 979 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 RNPEPL1Q9HAU8 725 aa12.89□□□□□ -0.35
SYNM-203ENST00000560674 NFKBIL1Q9UBC1 381 aaPredicted RBP12.89□□□□□ -0.35
SYNM-203ENST00000560674 GAKO14976 1311 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 EIF4BP23588 611 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 MRPS22P82650 360 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ASB7Q9H672 318 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 PTPRMP28827 1452 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 IFRD1O00458 451 aaPredicted RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 MYL12BO14950 172 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 MYL12AP19105 171 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 GRK4P32298 578 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 EPHB3P54753 998 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 YTHDF3Q7Z739 585 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ASZ1Q8WWH4 475 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ELMO3Q96BJ8 720 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 VAT1Q99536 393 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ATAD3AQ9NVI7 634 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 TCRBV5S4A2TA0A5A2 114 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 TMEM191CA6NGB0 347 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 H3BN98 237 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 RGS14O43566 566 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 PIGNO95427 931 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 CNPP09543 421 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 LRPAP1P30533 357 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 IL12RB1P42701 662 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ADARP55265 1226 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 PKNOX1P55347 436 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 RETSATQ6NUM9 610 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 OMA1Q96E52 524 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 COQ7Q99807 217 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 KCNK1O00180 336 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 URODP06132 367 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 DPEP1P16444 411 aa12.88□□□□□ -0.35
SYNM-203ENST00000560674 HOXB8P17481 243 aaPredicted RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 PAICSP22234 425 aaKnown RBP12.88□□□□□ -0.35
SYNM-203ENST00000560674 YWHAQP27348 245 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms