RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SLC12A1Q13621 1099 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ENPP2Q13822 863 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 SF3A2Q15428 464 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 CSRP2Q16527 193 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PTPRNQ16849 979 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 MAP7D1Q3KQU3 841 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PLEKHG6Q3KR16 790 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ARL13BQ3SXY8 428 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 TDRD12Q587J7 1177 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 RNF43Q68DV7 783 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ACAD10Q6JQN1 1059 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ARCQ7LC44 396 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 C14orf80Q86SX3 495 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PHF13Q86YI8 300 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 APCDD1Q8J025 514 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 OR2T3Q8NH03 318 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PIGKQ92643 395 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 RPL10LQ96L21 214 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PPP1R9BQ96SB3 815 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 NUP58Q9BVL2 599 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 MUC3BQ9H195 1237 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 TMEM245Q9H330 911 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 TSPY26PQ9H489 355 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 SMOC1Q9H4F8 434 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 HAUS4Q9H6D7 363 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 CD248Q9HCU0 757 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 SUN2Q9UH99 717 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 INTS6Q9UL03 887 aaKnown RBP13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ERVW-1Q9UQF0 538 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 PCDHGA5Q9Y5G8 931 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 SNX10Q9Y5X0 201 aa13.37□□□□□ -0.27
CTDSPL2-209ENST00000560620 ABCA7Q8IZY2 2146 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 IGHV1OR15-9A0A0B4J2B8 117 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 C2CD4BA6NLJ0 364 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 FOXD2O60548 495 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 CLDN11O75508 207 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 SKILP12757 684 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 GPD1P21695 349 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 MZF1P28698 734 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 RFC1P35251 1148 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 CTSOP43234 321 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 IRAK1P51617 712 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 CDH4P55283 916 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 CCDC14Q49A88 953 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 ACBD5Q5T8D3 534 aaPredicted RBP13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 SH3PXD2AQ5TCZ1 1133 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 LYSMD4Q5XG99 296 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 PPP1R2P3Q6NXS1 205 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 SCYL2Q6P3W7 929 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 MON1BQ7L1V2 547 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 TFAP2DQ7Z6R9 452 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 FAM124AQ86V42 546 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 FAM172AQ8WUF8 416 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 LMLNQ96KR4 655 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 MCEEQ96PE7 176 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 EDEM3Q9BZQ6 932 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 CD93Q9NPY3 652 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 ANLNQ9NQW6 1124 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 VPS45Q9NRW7 570 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 AIPL1Q9NZN9 384 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 SLC25A13Q9UJS0 675 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
CTDSPL2-209ENST00000560620 BCLAF3A2AJT9 711 aaKnown RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 SIGLEC16A6NMB1 481 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 PRR5-ARHGAP8B1AHC4 643 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 E9PAM4 449 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RNASEH1O60930 286 aaKnown RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 CNTN5O94779 1100 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 DNTTP04053 509 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RHOCP08134 193 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 ZNF806P0C7X5 589 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 TGM1P22735 817 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RRM1P23921 792 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 CD6P30203 668 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 PTGER3P43115 390 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 COPAP53621 1224 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 ARHGAP8P85298 464 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 SULT2A1Q06520 285 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 CAMK2GQ13555 558 aaPredicted RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RSPO4Q2I0M5 234 aaPredicted RBP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RAB6CQ53S08 254 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 WDR59Q6PJI9 974 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 MCOLN2Q8IZK6 566 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RNF214Q8ND24 703 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 GANCQ8TET4 914 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 C1orf74Q96LT6 269 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 HAPLN3Q96S86 360 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 RAB6CQ9H0N0 254 aa13.35□□□□□ -0.27
CTDSPL2-209ENST00000560620 MTG2Q9H4K7 406 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms