RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 LRRC31Q6UY01 552 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ZNF677Q86XU0 584 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 CACUL1Q86Y37 369 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ZCCHC9Q8N567 271 aaKnown RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 DEFB124Q8NES8 71 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 SNX19Q92543 992 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 CCDC114Q96M63 670 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 RPRD1AQ96P16 312 aaPredicted RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 PABPC3Q9H361 631 aaKnown RBP14.54□□□□□ -0.08
TPM1-223ENST00000560445 CYTH4Q9UIA0 394 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ERVW-1Q9UQF0 538 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ITIH6Q6UXX5 1313 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 PCDH15Q96QU1 1955 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 CHD8Q9HCK8 2581 aa14.54□□□□□ -0.08
TPM1-223ENST00000560445 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 TMEM8BA6NDV4 472 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 DFNA5O60443 496 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 CDH5P33151 784 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 CCDC15Q0P6D6 951 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 GRIK2Q13002 908 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 NME3Q13232 169 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 ZNF177Q13360 481 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 DRAP1Q14919 205 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 FAM183BPQ6ZVS7 135 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 PIP4P1Q86T03 277 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 FAM124AQ86V42 546 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 SLC47A2Q86VL8 602 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 ERICH1Q86X53 443 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 CFAP52Q8N1V2 620 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 ENOX1Q8TC92 643 aaKnown RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 C18orf8Q96DM3 657 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 LMLNQ96KR4 655 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 OMDQ99983 421 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 STK33Q9BYT3 514 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 SIX2Q9NPC8 291 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 PLCB1Q9NQ66 1216 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.53□□□□□ -0.08
TPM1-223ENST00000560445 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 FARP1Q9Y4F1 1045 aaPredicted RBP14.53□□□□□ -0.08
TPM1-223ENST00000560445 CEP295Q9C0D2 2601 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 CACNA1BQ00975 2339 aa14.53□□□□□ -0.08
TPM1-223ENST00000560445 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 M0QYT0 321 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 UCHL3P15374 230 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 CYP11B1P15538 503 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 C5AR1P21730 350 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 CD27P26842 260 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 NUDT1P36639 197 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 GRIA4P48058 902 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 PLK1P53350 603 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 FOXC1Q12948 553 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 EIF4EBP2Q13542 120 aaPredicted RBP14.52□□□□□ -0.09
TPM1-223ENST00000560445 CST6Q15828 149 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 ST3GAL2Q16842 350 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 SLC45A4Q5BKX6 768 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 MIIPQ5JXC2 388 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 KLHDC7AQ5VTJ3 777 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 FAM46CQ5VWP2 391 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 SASS6Q6UVJ0 657 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 TRIM72Q6ZMU5 477 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 ADAT2Q7Z6V5 191 aaKnown RBP14.52□□□□□ -0.09
TPM1-223ENST00000560445 CCAR2Q8N163 923 aaKnown RBP14.52□□□□□ -0.09
TPM1-223ENST00000560445 WFDC5Q8TCV5 224 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 SPAG5Q96R06 1193 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 C2orf49Q9BVC5 232 aaPredicted RBP14.52□□□□□ -0.09
TPM1-223ENST00000560445 WDCPQ9H6R7 721 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 ACP6Q9NPH0 428 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 ANO10Q9NW15 660 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 FBXL12Q9NXK8 326 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 COX16Q9P0S2 106 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 EIF2B4Q9UI10 523 aaKnown RBP14.52□□□□□ -0.09
TPM1-223ENST00000560445 PCDHGB2Q9Y5G2 931 aa14.52□□□□□ -0.09
TPM1-223ENST00000560445 F8VZ95 297 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 ALOX15BO15296 676 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 ABCB7O75027 752 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 SIN3BO75182 1162 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 MBD3O95983 291 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 ERBB2P04626 1255 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 DESP17661 470 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 CLCN1P35523 988 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 CDH4P55283 916 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 KRT83P78385 493 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 SIM1P81133 766 aaPredicted RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 SYCP1Q15431 976 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 PTPN20Q4JDL3 420 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 FAM102AQ5T9C2 384 aaPredicted RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 ARCQ7LC44 396 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 NAXDQ8IW45 347 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 DHX40Q8IX18 779 aaKnown RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 WDTC1Q8N5D0 677 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 ZNF366Q8N895 744 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 OR2T34Q8NGX1 318 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 OR8D1Q8WZ84 308 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 PGAP3Q96FM1 320 aaPredicted RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 CDC6Q99741 560 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 PRMT1Q99873 361 aaKnown RBP14.51□□□□□ -0.09
TPM1-223ENST00000560445 CD93Q9NPY3 652 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 LMBRD1Q9NUN5 540 aa14.51□□□□□ -0.09
TPM1-223ENST00000560445 ADAMTS1Q9UHI8 967 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms