RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 BAG1Q99933 345 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 TUBGCP2Q9BSJ2 902 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 BTBD1Q9H0C5 482 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 SGK2Q9HBY8 427 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 KCND1Q9NSA2 647 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 EIF2B4Q9UI10 523 aaKnown RBP14.07□□□□□ -0.16
SMAD3-214ENST00000560402 PCOLCE2Q9UKZ9 415 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 TLR6Q9Y2C9 796 aa14.07□□□□□ -0.16
SMAD3-214ENST00000560402 SEMA4FO95754 770 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 FTH1P19P0C7X4 201 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 GRIA4P48058 902 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 RPL34P49207 117 aaKnown RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 SGSHP51688 502 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 ST8SIA6P61647 398 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 TEAD4Q15561 434 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 MAN2A1Q16706 1144 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 USP30Q70CQ3 517 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 FAM124AQ86V42 546 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 CHCHD4Q8N4Q1 142 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 C1orf216Q8TAB5 229 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 DQX1Q8TE96 717 aaKnown RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 SNX19Q92543 992 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 PCMTD1Q96MG8 357 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 PRICKLE1Q96MT3 831 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 GAREM1Q9H706 876 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 TM7SF3Q9NS93 570 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-214ENST00000560402 PKD1L2Q7Z442 2459 aa14.06□□□□□ -0.16
SMAD3-214ENST00000560402 PTPRBP23467 1997 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 SRRM3A6NNA2 597 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 RNASEH1O60930 286 aaKnown RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CBFA2T3O75081 653 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 SLC6A4P31645 630 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CD70P32970 193 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 ACSL1P33121 698 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 PBX1P40424 430 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 RPS14P62263 151 aaKnown RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CDH18Q13634 790 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 ARID5BQ14865 1188 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 SUZ12Q15022 739 aaKnown RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 RFWD3Q6PCD5 774 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 TRIM59Q8IWR1 403 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 ZNF366Q8N895 744 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 ZNF397Q8NF99 534 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 FIBINQ8TAL6 211 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 BAHD1Q8TBE0 780 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 WFDC5Q8TCV5 224 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 STK32AQ8WU08 396 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 KAT5Q92993 513 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 TTC17Q96AE7 1141 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 FAM149B1Q96BN6 582 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 FCRL2Q96LA5 508 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-214ENST00000560402 FAM81BQ96LP2 452 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CAMK1GQ96NX5 476 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CDC6Q99741 560 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 ZSWIM1Q9BR11 485 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 PRSS16Q9NQE7 514 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 CNTN6Q9UQ52 1028 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 NCKAP1Q9Y2A7 1128 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 PLXNA2O75051 1894 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 SPEGQ15772 3267 aa14.05□□□□□ -0.16
SMAD3-214ENST00000560402 COL5A1P20908 1838 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 RNF225M0QZC1 329 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 PIK3R2O00459 728 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 TEX33O43247 280 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 MED7O43513 233 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 MFAP3LO75121 409 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 GABBR2O75899 941 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 MOCS3O95396 460 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 APOEP02649 317 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 AFPP02771 609 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 SRPRAP08240 638 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 CD27P26842 260 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 TERF1P54274 439 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 BNC1Q01954 994 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 HLA-BQ31612 363 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 HNRNPA1L2Q32P51 320 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 INAVAQ3KP66 663 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 SMYD5Q6GMV2 418 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 NADSYN1Q6IA69 706 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 ENOSF1Q7L5Y1 443 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 ARHGEF19Q8IW93 802 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 EHBP1Q8NDI1 1231 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 CLEC4CQ8WTT0 213 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 SLC39A13Q96H72 371 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 LMLNQ96KR4 655 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 MIS12Q9H081 205 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 RSPH9Q9H1X1 276 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 C6orf106Q9H6K1 298 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 TM9SF3Q9HD45 589 aa14.04□□□□□ -0.16
SMAD3-214ENST00000560402 ZNHIT6Q9NWK9 470 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 KIAA1522Q9P206 1035 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 TPX2Q9ULW0 747 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 FNDC3AQ9Y2H6 1198 aaKnown RBP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMAD3-214ENST00000560402 CABIN1Q9Y6J0 2220 aa14.03□□□□□ -0.16
SMAD3-214ENST00000560402 A0A1B0GVT2 93 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms