RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 ORAI3Q9BRQ5 295 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 PABPC3Q9H361 631 aaKnown RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 C6orf106Q9H6K1 298 aaPredicted RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 TM9SF3Q9HD45 589 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 FSCN3Q9NQT6 498 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 FBXL12Q9NXK8 326 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 STIM2Q9P246 746 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 DKK4Q9UBT3 224 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 ERVW-1Q9UQF0 538 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 ANKRD6Q9Y2G4 727 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CEP295Q9C0D2 2601 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 USP24Q9UPU5 2620 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ASPMQ8IZT6 3477 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ZFHX4Q86UP3 3567 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 A0A1B0GVM2 712 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 A0A1B0GVT2 93 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 BECN2A8MW95 431 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 E5RJQ4 531 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 F5H5T6 163 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PIK3R2O00459 728 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 YKT6O15498 198 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC7A4O43246 635 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 THAP12O43422 761 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 TNFSF14O43557 240 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 MAGEC1O60732 1142 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 HSF2BPO75031 334 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SIN3BO75182 1162 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ADH1BP00325 375 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 C1SP09871 688 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 FTH1P19P0C7X4 201 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 GOT1P17174 413 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC9A1P19634 815 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SPINK2P20155 84 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ABCB4P21439 1286 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 TACR2P21452 398 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PON1P27169 355 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC8A1P32418 973 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 NOS2P35228 1153 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SCNN1AP37088 669 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CTSKP43235 329 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 GRK6P43250 576 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CSNK1EP49674 416 aaKnown RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 GALCP54803 685 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CCDC15Q0P6D6 951 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 OVGP1Q12889 678 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PDCLQ13371 301 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ELAVL3Q14576 367 aaKnown RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CST6Q15828 149 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 KIF19Q2TAC6 998 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 INAVAQ3KP66 663 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ZC3H12AQ5D1E8 599 aaKnown RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 FSCBQ5H9T9 825 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 RABGAP1LQ5R372 815 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM46CQ5VWP2 391 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 RNF219Q5W0B1 726 aaPredicted RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 DENND1BQ6P3S1 775 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 C11orf57Q6ZUT1 292 aaPredicted RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC26A9Q7LBE3 791 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 TAC4Q86UU9 113 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 LGI2Q8N0V4 545 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 GALNT15Q8N3T1 639 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 OR2I1PQ8NGU4 316 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 SETD7Q8WTS6 366 aaKnown RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PGAP3Q96FM1 320 aaPredicted RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PRICKLE1Q96MT3 831 aaPredicted RBP8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 NEUROG2Q9H2A3 272 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 RETREG1Q9H6L5 497 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 ERVMER34-1Q9H9K5 563 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CYTH4Q9UIA0 394 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 KLK13Q9UKR3 277 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 CTNND2Q9UQB3 1225 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
PTCSC3-201ENST00000556013 A0A1B0GTQ1 180 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 CXorf51AA0A1B0GTR3 108 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 SRRM3A6NNA2 597 aaPredicted RBP8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 BIN1O00499 593 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 MCF2LO15068 1137 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 ALOX15BO15296 676 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 ATP9BO43861 1147 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 RNGTTO60942 597 aaKnown RBP8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 GADD45BO75293 160 aaPredicted RBP8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 CLDN11O75508 207 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 F9P00740 461 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 IGHV4-34P06331 123 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 ERCC5P28715 1186 aaPredicted RBP8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 CDH5P33151 784 aaPredicted RBP8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 KRT9P35527 623 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 RXRGP48443 463 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 CCT8P50990 548 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 CDH4P55283 916 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC6A3Q01959 620 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 MAN2A1Q16706 1144 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC45A4Q5BKX6 768 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 BRMS1LQ5PSV4 323 aa8.03□□□□□ -1.12
PTCSC3-201ENST00000556013 RAP1GAP2Q684P5 730 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms