RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZCCHC9Q8N567 271 aaKnown RBP14.26□□□□□ -0.13
PCNX4-209ENST00000555569 STK33Q9BYT3 514 aa14.26□□□□□ -0.13
PCNX4-209ENST00000555569 MIR1-1HGQ9H1L0 117 aa14.26□□□□□ -0.13
PCNX4-209ENST00000555569 RSPH9Q9H1X1 276 aaPredicted RBP14.26□□□□□ -0.13
PCNX4-209ENST00000555569 VPS16Q9H269 839 aa14.26□□□□□ -0.13
PCNX4-209ENST00000555569 SLC32A1Q9H598 525 aa14.26□□□□□ -0.13
PCNX4-209ENST00000555569 RRN3Q9NYV6 651 aa14.26□□□□□ -0.13
PCNX4-209ENST00000555569 CACNA1BQ00975 2339 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ITIH6Q6UXX5 1313 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 A0A1B0GVM2 712 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 TCAF2A6NFQ2 919 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 UPK3BL1B0FP48 263 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 UPK3BL2E5RIL1 263 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 M0QYT0 321 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 SIN3BO75182 1162 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 SEMA4FO95754 770 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 TPM2P07951 284 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 PDGFRAP16234 1089 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ACSL1P33121 698 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 MATKP42679 507 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 GABRB2P47870 512 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 OXCT1P55809 520 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 RNASE9P60153 205 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 SHC2P98077 582 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ECT2LQ008S8 904 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 GRIK2Q13002 908 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 SEMA3BQ13214 749 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 AUHQ13825 339 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ARID5BQ14865 1188 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 KRT31Q15323 416 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 CDKAL1Q5VV42 579 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 RNF219Q5W0B1 726 aaPredicted RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 FBXL22Q6P050 247 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 PIP4P1Q86T03 277 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ERICH1Q86X53 443 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 DHX40Q8IX18 779 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 CCAR2Q8N163 923 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 OR2I1PQ8NGU4 316 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 C18orf8Q96DM3 657 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 RPRD1AQ96P16 312 aaPredicted RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 ZDHHC5Q9C0B5 715 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 BTBD1Q9H0C5 482 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 GANQ9H2C0 597 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 C6orf106Q9H6K1 298 aaPredicted RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 DNAAF2Q9NVR5 837 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 EIF2B4Q9UI10 523 aaKnown RBP14.25□□□□□ -0.13
PCNX4-209ENST00000555569 CABIN1Q9Y6J0 2220 aa14.25□□□□□ -0.13
PCNX4-209ENST00000555569 EDDM13A0A1B0GTR0 161 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 TARSL2A2RTX5 802 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 TTC34A8MYJ7 566 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 F8VZ95 297 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 BCAT2O15382 392 aaPredicted RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 LSM8O95777 96 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 MZF1P28698 734 aaPredicted RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 SCNN1AP37088 669 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 PLK1P53350 603 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 CENPCQ03188 943 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 C9orf64Q5T6V5 341 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 FAM102AQ5T9C2 384 aaPredicted RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 OTUD1Q5VV17 481 aaPredicted RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 CXorf57Q6NSI4 855 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 NOP9Q86U38 636 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 XYLT1Q86Y38 959 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 MSANTD4Q8NCY6 345 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 EPS8L1Q8TE68 723 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 SNX19Q92543 992 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 IGSF8Q969P0 613 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 RPL10LQ96L21 214 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 NPY6RQ99463 290 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 PABPC3Q9H361 631 aaKnown RBP14.24□□□□□ -0.13
PCNX4-209ENST00000555569 SGK2Q9HBY8 427 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 PIGVQ9NUD9 493 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 SLCO3A1Q9UIG8 710 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 VANGL2Q9ULK5 521 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 STAP1Q9ULZ2 295 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 SCML1Q9UN30 329 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 NCKAP1Q9Y2A7 1128 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 HS3ST4Q9Y661 456 aa14.24□□□□□ -0.13
PCNX4-209ENST00000555569 CEP295Q9C0D2 2601 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 FAM170AA1A519 330 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 GOLGA6L22H0YM25 854 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 PAGE1O75459 146 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 GJB3O75712 270 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 MMEP08473 750 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 CD59P13987 128 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 TFE3P19532 575 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 GGCXP38435 758 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 NNMTP40261 264 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 CXCR3P49682 368 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 STK19P49842 368 aaPredicted RBP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 KLK7P49862 253 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SULT1E1P49888 294 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SULT2A1Q06520 285 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SFSWAPQ12872 951 aaKnown RBP14.23□□□□□ -0.13
PCNX4-209ENST00000555569 CST6Q15828 149 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 BRMS1LQ5PSV4 323 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 FKBP15Q5T1M5 1219 aa14.23□□□□□ -0.13
PCNX4-209ENST00000555569 SASS6Q6UVJ0 657 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms