RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CKAP5Q14008 2032 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 CFAP54Q96N23 3096 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 A0A1W2PQF6 199 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 WASH3PC4AMC7 463 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
SRP54-206ENST00000555317 SRGAP2O75044 1071 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 RHOBTB1O94844 696 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 NNMTP40261 264 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 ZNF143P52747 638 aaPredicted RBP12.47□□□□□ -0.41
SRP54-206ENST00000555317 CDH4P55283 916 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 SULT2A1Q06520 285 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 PITRM1Q5JRX3 1037 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 TMEM215Q68D42 235 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 SCYL2Q6P3W7 929 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 WDR59Q6PJI9 974 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 KIAA1324Q6UXG2 1013 aaKnown RBP12.47□□□□□ -0.41
SRP54-206ENST00000555317 VSTM4Q8IW00 320 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 SUMF1Q8NBK3 374 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 IGSF8Q969P0 613 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 CNPY3Q9BT09 278 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 MUC3BQ9H195 1237 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 DEF6Q9H4E7 631 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 MRPL47Q9HD33 250 aaKnown RBP12.47□□□□□ -0.41
SRP54-206ENST00000555317 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
SRP54-206ENST00000555317 HCN2Q9UL51 889 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 GON4LQ3T8J9 2241 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 SPTBN4Q9H254 2564 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
SRP54-206ENST00000555317 ABCA7Q8IZY2 2146 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 E9PAM4 449 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 DDX3XO00571 662 aaKnown RBP eCLIP12.46□□□□□ -0.412e-11■■■□□ 16.3
SRP54-206ENST00000555317 CCP110O43303 1012 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 ZNF217O75362 1048 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 ENDOD1O94919 500 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 RHOCP08134 193 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 ACADMP11310 421 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 GABRG2P18507 467 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 NDUFV2P19404 249 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 PRKCHP24723 683 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 PSMA2P25787 234 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 RPL7AP62424 266 aaKnown RBP12.46□□□□□ -0.41
SRP54-206ENST00000555317 ECT2LQ008S8 904 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 MAMLD1Q13495 774 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 PLEKHG6Q3KR16 790 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 FSCBQ5H9T9 825 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 EFHC2Q5JST6 749 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 C6orf118Q5T5N4 469 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 KIAA1211LQ6NV74 962 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 RWDD4Q6NW29 188 aaKnown RBP12.46□□□□□ -0.41
SRP54-206ENST00000555317 TMC6Q7Z403 805 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 KIAA0907Q7Z7F0 614 aaPredicted RBP12.46□□□□□ -0.41
SRP54-206ENST00000555317 C14orf80Q86SX3 495 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 TTC17Q96AE7 1141 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 FBRSQ9HAH7 460 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 PRDM16Q9HAZ2 1276 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 OR12D3Q9UGF7 316 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 SUN2Q9UH99 717 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 ADAMTS1Q9UHI8 967 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 SLC25A13Q9UJS0 675 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 VPS28Q9UK41 221 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 INVSQ9Y283 1065 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 SNX10Q9Y5X0 201 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 DOCK4Q8N1I0 1966 aa12.46□□□□□ -0.41
SRP54-206ENST00000555317 RNASEH1O60930 286 aaKnown RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 RETP07949 1114 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 SRPRAP08240 638 aaKnown RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 HLA-EP13747 358 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 OR1E1P30953 314 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 ADRA1BP35368 520 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 HDAC4P56524 1084 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 ENPP2Q13822 863 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 SH3PXD2AQ5TCZ1 1133 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 HGSNATQ68CP4 663 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 BNIPLQ7Z465 357 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 TFAP2DQ7Z6R9 452 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 KBTBD6Q86V97 674 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 CNGA4Q8IV77 575 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 FAM160A2Q8N612 972 aaPredicted RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 GPR161Q8N6U8 529 aaKnown RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 OR8K1Q8NGG5 319 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 CENPIQ92674 756 aaPredicted RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
SRP54-206ENST00000555317 ZYG11BQ9C0D3 744 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 ANLNQ9NQW6 1124 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 TMPRSS4Q9NRS4 437 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 ERVW-1Q9UQF0 538 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 PLXND1Q9Y4D7 1925 aa12.45□□□□□ -0.42
SRP54-206ENST00000555317 TCRBV5S1A1TA0A578 114 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 DCLK1O15075 740 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 NDUFS2O75306 463 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 RNF8O76064 485 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 CNTN5O94779 1100 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 PLEKP08567 350 aaPredicted RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 MZF1P28698 734 aaPredicted RBP12.44□□□□□ -0.42
SRP54-206ENST00000555317 P2RY2P41231 377 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 IRAK1P51617 712 aa12.44□□□□□ -0.42
SRP54-206ENST00000555317 AIF1P55008 147 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms