RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MYL4P12829 197 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 GPC1P35052 558 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 THPOP40225 353 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 RHOAP61586 193 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DDR2Q16832 855 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 FAM83AQ86UY5 434 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 FAM71AQ8IYT1 594 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 APOL4Q9BPW4 351 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 SERHL2Q9H4I8 314 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 SYNDIG1Q9H7V2 258 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 SERHLQ9NQF3 203 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DDX43Q9NXZ2 648 aaKnown RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DYRK1BQ9Y463 629 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ASTN1O14525 1302 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ANKRD63C9JTQ0 380 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 MED26O95402 600 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ZSCAN5DPP0CG00 497 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 NFE2Q16621 373 aaPredicted RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 OTUD3Q5T2D3 398 aaPredicted RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 TRIQKQ629K1 86 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ERAP2Q6P179 960 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DNAJC19Q96DA6 116 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 TPRKBQ9Y3C4 175 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ATXN2Q99700 1313 aaKnown RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 SIGLEC16A6NMB1 481 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 VAPBO95292 243 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DPEP1P16444 411 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 PIK3R1P27986 724 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 IL12RB1P42701 662 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 RXRGP48443 463 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 NEDD8Q15843 81 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 KRT77Q7Z794 578 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 FNDC5Q8NAU1 212 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 WDR36Q8NI36 951 aaKnown RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 TBC1D10AQ9BXI6 508 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 LRMDAQ9H2I8 198 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 COPS7BQ9H9Q2 264 aaPredicted RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 FANCEQ9HB96 536 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 TAS2R13Q9NYV9 303 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ATP4AP20648 1035 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DSG3P32926 999 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 CASP5P51878 434 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ARHGAP15Q53QZ3 475 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 DPP10Q8N608 796 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 VGLL2Q8N8G2 317 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ANKRD49Q8WVL7 239 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 APBA2Q99767 749 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
VTI1B-204ENST00000554659 POMKQ9H5K3 350 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 STK39Q9UEW8 545 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 ENOPH1Q9UHY7 261 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 GAKO14976 1311 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 GNG14A0A1W2PPG7 69 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 TPP1O14773 563 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CAPN1P07384 714 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 MSH3P20585 1137 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 TPP2P29144 1249 aaPredicted RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 FEN1P39748 380 aaKnown RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 COX10Q12887 443 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CAMK2GQ13555 558 aaPredicted RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 SLC9A9Q8IVB4 645 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 RNF148Q8N7C7 305 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 UTP15Q8TED0 518 aaKnown RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 PYDC1Q8WXC3 89 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 RORBQ92753 470 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 TMEM51Q9NW97 253 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 SNTG2Q9NY99 539 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 RAD51BO15315 384 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 PTDSS1P48651 473 aaKnown RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CHN2P52757 468 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 NDUFA5Q16718 116 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 PDZK1Q5T2W1 519 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 SLC30A10Q6XR72 485 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 ARCQ7LC44 396 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 ZNF614Q8N883 585 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 B3GALNT2Q8NCR0 500 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 GLIS3Q8NEA6 775 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 WDR41Q9HAD4 459 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CCDC167Q9P0B6 97 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 ADAM28Q9UKQ2 775 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CHKBQ9Y259 395 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CYP3A7-CYP3A51PA0A087WV96 503 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 TK2O00142 265 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 NKRFO15226 690 aaKnown RBP eCLIP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 PIGNO95427 931 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 GJB6O95452 261 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 ITGAVP06756 1048 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CYP3A7P24462 503 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 TTKP33981 857 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 HALP42357 657 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 DLG4P78352 724 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CTXN3Q4LDR2 81 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 B3GNT6Q6ZMB0 384 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 NEK10Q6ZWH5 1172 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 EXOC3L1Q86VI1 746 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 DEFB106AQ8N104 65 aa14.21□□□□□ -0.13
VTI1B-204ENST00000554659 INPP4AQ96PE3 977 aaPredicted RBP14.21□□□□□ -0.13
VTI1B-204ENST00000554659 CDK5RAP1Q96SZ6 601 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms