RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 HLA-DRAP01903 254 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 EPORP19235 508 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RAB14P61106 215 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CYP24A1Q07973 514 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CASP8Q14790 479 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C6orf132Q5T0Z8 1188 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PRR11Q96HE9 360 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C6orf62Q9GZU0 229 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FAM192AQ9GZU8 254 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TRABDQ9H4I3 376 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 LDAHQ9H6V9 325 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CDC23Q9UJX2 597 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 COG5Q9UP83 839 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 H7C1W4 665 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BPNT1O95861 308 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GZMAP12544 262 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DNASE1L1P49184 302 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 FCGRTP55899 365 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 HEXDCQ8WVB3 486 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C17orf75Q9HAS0 396 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ABCB9Q9NP78 766 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DNAJC11Q9NVH1 559 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 POU2F3Q9UKI9 436 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TBX1O43435 398 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BCL10O95999 233 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RNF224P0DH78 156 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 C1orf61Q13536 156 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DLG2Q15700 870 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZIK1Q3SY52 487 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZFPM1Q8IX07 1006 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PDIK1LQ8N165 341 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GOLM1Q8NBJ4 401 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SLC9A6Q92581 669 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RBM14Q96PK6 669 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MARK1Q9P0L2 795 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF222Q9UK12 451 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 AP4E1Q9UPM8 1137 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DDTLA6NHG4 134 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 M0R3G1 203 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SGTAO43765 313 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ERAL1O75616 437 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZMPSTE24O75844 475 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 DRAP1Q14919 205 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CLHC1Q8NHS4 586 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CXorf40BQ96DE9 158 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 KXD1Q9BQD3 176 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NUDT12Q9BQG2 462 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 IFT140Q96RY7 1462 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 USP27XA6NNY8 438 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GIMD1P0DJR0 217 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MPSTP25325 297 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PSMC2P35998 433 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 HDAC4P56524 1084 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 STX4Q12846 297 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CENPUQ71F23 418 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 UBQLNLQ8IYU4 475 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PDCD10Q9BUL8 212 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SRPRBQ9Y5M8 271 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 METP08581 1390 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 EPHB6O15197 1021 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MFAP3LO75121 409 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TOMM70O94826 608 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OR5F1O95221 314 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 HNF1BP35680 557 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ALDH7A1P49419 539 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MECP2P51608 486 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 USP11P51784 963 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NRG1Q02297 640 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MTAPQ13126 283 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NFE2L1Q14494 772 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 NEDD8Q15843 81 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF648Q5T619 568 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TTLL10Q6ZVT0 673 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TRAPPC5Q8IUR0 188 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SPERTQ8NA61 448 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SUSD6Q92537 303 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ELOVL2Q9NXB9 296 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MTSS1O43312 755 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GJA5P36382 358 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 BRCC3P46736 316 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CRYMQ14894 314 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 MPPE1Q53F39 396 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 THAP3Q8WTV1 239 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 KBTBD7Q8WVZ9 684 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ARHGAP45Q92619 1136 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PRCCQ92733 491 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 WDR77Q9BQA1 342 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PRMT8Q9NR22 394 aaPredicted RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SPG21Q9NZD8 308 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 ZNF208O43345 1280 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 TIMM44O43615 452 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 OR10H2O60403 315 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 PTAFRP25105 342 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 LBX1P52954 281 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 CDKL1Q00532 357 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 SGCBQ16585 318 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 RUNDC3AQ59EK9 446 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 INTS6LQ5JSJ4 861 aaKnown RBP3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GLB1LQ6UWU2 654 aa3.37□□□□□ -1.87
SYNE2-212ENST00000554584 GOLPH3LQ9H4A5 285 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms