RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FAHP16930 419 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 SOX5P35711 763 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ID4P47928 161 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 RABGGTBP53611 331 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 BCAR1P56945 870 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 LILRA4P59901 499 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 IRF9Q00978 393 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 CETN1Q12798 172 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 SSPNQ14714 243 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ARHGAP44Q17R89 818 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 SGSM1Q2NKQ1 1148 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 BTBD8Q5XKL5 378 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 SPECC1LQ69YQ0 1117 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ETV3LQ6ZN32 361 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 LIMS2Q7Z4I7 341 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 LRRC43Q8N309 656 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 NEK11Q8NG66 645 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 TAF4BQ92750 862 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 KAT5Q92993 513 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 UROC1Q96N76 676 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 YME1L1Q96TA2 773 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 RAD9AQ99638 391 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 NAA15Q9BXJ9 866 aaKnown RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 MRPL9Q9BYD2 267 aaKnown RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 RNF38Q9H0F5 515 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 SDCBP2Q9H190 292 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 MTIF3Q9H2K0 278 aaKnown RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 UBE2TQ9NPD8 197 aaPredicted RBP6.7□□□□□ -1.34
SCFD1-212ENST00000554486 PCDH12Q9NPG4 1184 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 OXSMQ9NWU1 459 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 GDAP2Q9NXN4 497 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 INSL6Q9Y581 213 aa6.7□□□□□ -1.34
SCFD1-212ENST00000554486 MYO7AQ13402 2215 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TSC2P49815 1807 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 LCHNA4D1U4 455 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 KPNA7A9QM74 516 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NT5C1B-RDH14C9J2C7 533 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM189-UBE2V1I3L0A0 370 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 I3L4J1 428 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NEMP1O14524 444 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NRP1O14786 923 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TGM5O43548 720 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 B3GAT3O94766 335 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NCAM1P13591 858 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 MYOGP15173 224 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 UCHL3P15374 230 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PI3P19957 117 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PBX3P40426 434 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PNPLA4P41247 253 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 BRCC3P46736 316 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 OR1G1P47890 313 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TAF6P49848 677 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 FXR1P51114 621 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 POLR2FP61218 127 aaKnown RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 GOLGA8FQ08AF8 430 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 GOLGA8DPQ0D2H9 430 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 MYO1EQ12965 1108 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 BTG3Q14201 252 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PTPROQ16827 1216 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 WDR72Q3MJ13 1102 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF667Q5HYK9 610 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 DCLRE1AQ6PJP8 1040 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 SCARA5Q6ZMJ2 495 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 RRAGAQ7L523 313 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM173Q86WV6 379 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TMEFF1Q8IYR6 380 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 COLGALT1Q8NBJ5 622 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 SPC24Q8NBT2 197 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 HASPINQ8TF76 798 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TOE1Q96GM8 510 aaKnown RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 FAXDC2Q96IV6 333 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PDLIM2Q96JY6 352 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 SENP8Q96LD8 212 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 ZNF560Q96MR9 790 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 FAM193BQ96PV7 902 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TMEM175Q9BSA9 504 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NUP58Q9BVL2 599 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 GPR88Q9GZN0 384 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PRO3102Q9H379 93 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 SMYD3Q9H7B4 428 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 NLRC4Q9NPP4 1024 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 SPTLC3Q9NUV7 552 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 THG1LQ9NWX6 298 aaKnown RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 MARCH5Q9NX47 278 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 CEP72Q9P209 647 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 FBXL5Q9UKA1 691 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 DNAJC12Q9UKB3 198 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 CAPN11Q9UMQ6 739 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 PRG3Q9Y2Y8 225 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TRANK1O15050 2925 aa6.69□□□□□ -1.34
SCFD1-212ENST00000554486 TRIOBPQ9H2D6 2365 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 M0QZQ0 153 aa6.68□□□□□ -1.34
SCFD1-212ENST00000554486 FOXN3O00409 490 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-212ENST00000554486 CYB561D2O14569 222 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms