RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 CFAP97Q9P2B7 532 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 TBC1D14Q9P2M4 693 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 SAE1Q9UBE0 346 aaPredicted RBP7.87□□□□□ -1.15
TDP1-209ENST00000554180 ZNF212Q9UDV6 495 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 SNX10Q9Y5X0 201 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 MTCH2Q9Y6C9 303 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 ANAPC1Q9H1A4 1944 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 OBSL1O75147 1896 aa7.87□□□□□ -1.15
TDP1-209ENST00000554180 H7C0C1 242 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 SGK1O00141 431 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 SLC9A3R1O14745 358 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 STK10O94804 968 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 FSHRP23945 695 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 SLC6A4P31645 630 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ETFBP38117 255 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 GARSP41250 739 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 ATP5OP48047 213 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 KCNJ1P48048 391 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 YBEYP58557 167 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 NTHL1P78549 312 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ZXDBP98169 803 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 PPIDQ08752 370 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 SLC10A2Q12908 348 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 GRIN2CQ14957 1233 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ZNF77Q15935 545 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 P3H1Q32P28 736 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 PARP15Q460N3 678 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ATAT1Q5SQI0 421 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 DUPD1Q68J44 220 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 HEATR6Q6AI08 1181 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 CES5AQ6NT32 575 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 GPR153Q6NV75 609 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 DARS2Q6PI48 645 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 C4orf22Q6V702 233 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ZNF783Q6ZMS7 281 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 GSTA5Q7RTV2 222 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 SETD3Q86TU7 594 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 LGI2Q8N0V4 545 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 CELF5Q8N6W0 485 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 ZNF557Q8N988 423 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 BBOF1Q8ND07 529 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ITFG1Q8TB96 612 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 SH3RF2Q8TEC5 729 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 RSAD2Q8WXG1 361 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 FATE1Q969F0 183 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 IGSF8Q969P0 613 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 E2F7Q96AV8 911 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 PABPC5Q96DU9 382 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 RIPOR3Q96MK2 946 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 PRICKLE1Q96MT3 831 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 TSGA13Q96PP4 275 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 GAS2L1Q99501 681 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 FAM118BQ9BPY3 351 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 TMEM121Q9BTD3 319 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 TRPV4Q9HBA0 871 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 GDF3Q9NR23 364 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 FAM114A2Q9NRY5 505 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 MPP6Q9NZW5 540 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 CLEC1BQ9P126 229 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.86□□□□□ -1.15
TDP1-209ENST00000554180 DMGDHQ9UI17 866 aaKnown RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 RAB21Q9UL25 225 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 NEU2Q9Y3R4 380 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 MFHAS1Q9Y4C4 1052 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 ZFP37Q9Y6Q3 630 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 V9GYY5 206 aaPredicted RBP7.86□□□□□ -1.15
TDP1-209ENST00000554180 DENND4CQ5VZ89 1909 aa7.86□□□□□ -1.15
TDP1-209ENST00000554180 NOTCH4Q99466 2003 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 ILVBLA1L0T0 632 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 CCDC151A5D8V7 595 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ARHGAP42A6NI28 874 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 SMAPO00193 183 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 DYNC1I1O14576 645 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 LINC01565O15544 149 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 RAMP2O60895 175 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TBX10O75333 385 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 GCATO75600 419 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 CNTN5O94779 1100 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 PRAMEF12O95522 483 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 KRT14P02533 472 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 OR1E1P30953 314 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 HOXD11P31277 338 aaPredicted RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 ACTN2P35609 894 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 MTHFRP42898 656 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 OXCT1P55809 520 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 GUCY2DQ02846 1103 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ADGRE1Q14246 886 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 BRD3Q15059 726 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 MPPE1Q53F39 396 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ALFQ53S48 1182 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TIGD7Q6NT04 549 aaPredicted RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 RFWD3Q6PCD5 774 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 TFAP2DQ7Z6R9 452 aa7.85□□□□□ -1.15
TDP1-209ENST00000554180 ZC3H18Q86VM9 953 aaKnown RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 ARID3BQ8IVW6 561 aaPredicted RBP7.85□□□□□ -1.15
TDP1-209ENST00000554180 ARHGAP12Q8IWW6 846 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms