RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 UNC45BQ8IWX7 931 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 SCML4Q8N228 414 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 ADAM32Q8TC27 787 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 ZNF606Q8WXB4 792 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 IRGQQ8WZA9 623 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 PRICKLE1Q96MT3 831 aaPredicted RBP13.9□□□□□ -0.18
NUP188-211ENST00000550219 DNAAF2Q9NVR5 837 aaKnown RBP13.9□□□□□ -0.18
NUP188-211ENST00000550219 STOML2Q9UJZ1 356 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 ZMIZ1Q9ULJ6 1067 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 PLA2G4CQ9UP65 541 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 BZW2Q9Y6E2 419 aaKnown RBP13.9□□□□□ -0.18
NUP188-211ENST00000550219 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 CKAP5Q14008 2032 aa13.9□□□□□ -0.18
NUP188-211ENST00000550219 UPK3BL1B0FP48 263 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 UPK3BL2E5RIL1 263 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 TIMM44O43615 452 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 ACSL4O60488 711 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 FBXO21O94952 628 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 IGLV3-27P01718 113 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 POLR2EP19388 210 aaKnown RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 KLHL30Q0D2K2 578 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 CCDC173Q0VFZ6 552 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 CAMK2GQ13555 558 aaPredicted RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 TSR1Q2NL82 804 aaKnown RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 FAM133BQ5BKY9 247 aaKnown RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 PIK3R6Q5UE93 754 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 NADSYN1Q6IA69 706 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 NOP9Q86U38 636 aaKnown RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 CARNMT1Q8N4J0 409 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.89□□□□□ -0.19
NUP188-211ENST00000550219 HJURPQ8NCD3 748 aaPredicted RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 CADM4Q8NFZ8 388 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 DQX1Q8TE96 717 aaKnown RBP13.89□□□□□ -0.19
NUP188-211ENST00000550219 SERPINB11Q96P15 392 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 MTG2Q9H4K7 406 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 PCDHGC3Q9UN70 934 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 PCDHB9Q9Y5E1 797 aa13.89□□□□□ -0.19
NUP188-211ENST00000550219 CHD8Q9HCK8 2581 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 SSU72P8A0A1W2PR75 194 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 METTL12A8MUP2 240 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 BCAT2O15382 392 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 GJB3O75712 270 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 IGLV3-19P01714 112 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 DNTTP04053 509 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ATP5BP06576 529 aaKnown RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 SKILP12757 684 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 CHRNB2P17787 502 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ACSL1P33121 698 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 RPS24P62847 133 aaKnown RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 FMO1Q01740 532 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 CDR2Q01850 454 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 CDH18Q13634 790 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 PTPRNQ16849 979 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ASTE1Q2TB18 679 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 TTC31Q49AM3 519 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 DENND1BQ6P3S1 775 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 TAC4Q86UU9 113 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 CHCHD4Q8N4Q1 142 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ZCCHC14Q8WYQ9 949 aaKnown RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 DNASE2BQ8WZ79 361 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 GATA6Q92908 595 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 MYEOVQ96EZ4 313 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 FCRL2Q96LA5 508 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 HSFY1Q96LI6 401 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 TMEM245Q9H330 911 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 HAUS4Q9H6D7 363 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 C6orf106Q9H6K1 298 aaPredicted RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 IL21RQ9HBE5 538 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ZNHIT6Q9NWK9 470 aaKnown RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 RALYQ9UKM9 306 aaKnown RBP13.88□□□□□ -0.19
NUP188-211ENST00000550219 NAALADL1Q9UQQ1 740 aa13.88□□□□□ -0.19
NUP188-211ENST00000550219 ASCC3Q8N3C0 2202 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 CAPN9O14815 690 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 IRAK2O43187 625 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 THAP12O43422 761 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 MED7O43513 233 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 FSBPO95073 299 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CER1O95813 267 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 DLDP09622 509 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 RDXP35241 583 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 MATKP42679 507 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 NUMBP49757 651 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 ST8SIA6P61647 398 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 RPS14P62263 151 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 RING1Q06587 406 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 LAYNQ6UX15 382 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CHSY1Q86X52 802 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 TMEM139Q8IV31 216 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CCDC117Q8IWD4 279 aaPredicted RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 SCUBE3Q8IX30 993 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CFAP52Q8N1V2 620 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 GANCQ8TET4 914 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 SETD7Q8WTS6 366 aaKnown RBP13.87□□□□□ -0.19
NUP188-211ENST00000550219 SLC20A1Q8WUM9 679 aa13.87□□□□□ -0.19
NUP188-211ENST00000550219 CHP1Q99653 195 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms