RNA–Protein interactions for RNA: ENST00000550144.1

CTDSP2-206, Transcript of CTD small phosphatase 2, humanhuman

TSL 4

Gene CTDSP2, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-206ENST00000550144 CHD9Q3L8U1 2897 aa11.87□□□□□ -0.51
CTDSP2-206ENST00000550144 E2F8A0AVK6 867 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 ZSCAN5CA6NGD5 496 aaPredicted RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 DYNC1I1O14576 645 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 KCNN4O15554 427 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 CNTN5O94779 1100 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 IFNB1P01574 187 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 KRT14P02533 472 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 IRAK1P51617 712 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 GALNT2Q10471 571 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 GRIN2CQ14957 1233 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 TRIP13Q15645 432 aaPredicted RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 ALFQ53S48 1182 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 TTC39BQ5VTQ0 682 aaPredicted RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 DUPD1Q68J44 220 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 SYCE2Q6PIF2 218 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 TFAP2DQ7Z6R9 452 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 NLRP14Q86W24 1093 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 CCDC33Q8N5R6 958 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 FAM71DQ8N9W8 422 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 CCNYQ8ND76 341 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 ITFG1Q8TB96 612 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 USP13Q92995 863 aaPredicted RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 CELF6Q96J87 481 aaKnown RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 APOL5Q9BWW9 433 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 TRIM31Q9BZY9 425 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 KLC2Q9H0B6 622 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 C10orf88Q9H8K7 445 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 GDF3Q9NR23 364 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 RAB21Q9UL25 225 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 MTCH2Q9Y6C9 303 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 ZFP37Q9Y6Q3 630 aaPredicted RBP11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 MYO7AQ13402 2215 aa11.86□□□□□ -0.51
CTDSP2-206ENST00000550144 ESYT3A0FGR9 886 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 TYW5A2RUC4 315 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 DFFAO00273 331 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 TRDMT1O14717 391 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 SCAMP3O14828 347 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 TSPAN3O60637 253 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CLDN11O75508 207 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 STK10O94804 968 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 RBL1P28749 1068 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 TNFRSF8P28908 595 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 WEE1P30291 646 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CHKAP35790 457 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 ADCY8P40145 1251 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 GARSP41250 739 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 MAPKAPK2P49137 400 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 NDST2P52849 883 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 DRG2P55039 364 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CDH4P55283 916 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 VSNL1P62760 191 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 AP1B1Q10567 949 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CUL1Q13616 776 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 PRKD1Q15139 912 aaPredicted RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 ATAT1Q5SQI0 421 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 HEATR6Q6AI08 1181 aaKnown RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CES5AQ6NT32 575 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 B4GALNT4Q76KP1 1039 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CIR1Q86X95 450 aaPredicted RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 FAM217AQ8IXS0 508 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CFAP52Q8N1V2 620 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 UMODL1-AS1Q8N2C9 162 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 HJURPQ8NCD3 748 aaPredicted RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 ZSCAN18Q8TBC5 510 aaPredicted RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CASKIN2Q8WXE0 1202 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 IFT81Q8WYA0 676 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 SEC14L1Q92503 715 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 MYEOVQ96EZ4 313 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 ZSWIM3Q96MP5 696 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 PRICKLE1Q96MT3 831 aaPredicted RBP11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 LGMNQ99538 433 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 DPH5Q9H2P9 285 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 KIF9Q9HAQ2 790 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 USP29Q9HBJ7 922 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 PCDH9Q9HC56 1237 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 CCL26Q9Y258 94 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 SNX24Q9Y343 169 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
CTDSP2-206ENST00000550144 NOTCH4Q99466 2003 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 A0A1B0GVM2 712 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 TCAF2A6NFQ2 919 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 BHMG1C9JSJ3 638 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 MTSS1O43312 755 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ERLIN1O75477 346 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 PRAMEF12O95522 483 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 TCF3P15923 654 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 POU3F3P20264 500 aaPredicted RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 IGFBP4P22692 258 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 OR1E1P30953 314 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ACTN2P35609 894 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 VPS41P49754 854 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 GDF10P55107 478 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 RPS24P62847 133 aaKnown RBP11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 ZNF33AQ06730 810 aa11.84□□□□□ -0.51
CTDSP2-206ENST00000550144 PPIDQ08752 370 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms