RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SERGEFQ9UGK8 458 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 BPTFQ12830 3046 aa10.22□□□□□ -0.77
TRAFD1-207ENST00000550051 A0A1W2PP55 124 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 TLR4O00206 839 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 WNT9AO14904 365 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ATXN7O15265 892 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 MID1O15344 667 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 RRP8O43159 456 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 LATO43561 262 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 TLX3O43711 291 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 RFPL3O75679 317 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 PAEPP09466 180 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 EPB41P11171 864 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 GOT1P17174 413 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 C5AR1P21730 350 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ITPKBP27987 946 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 CSKP41240 450 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ARRB1P49407 418 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ACADVLP49748 655 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 NDUFA8P51970 172 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 TBX4P57082 545 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 NNTQ13423 1086 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 CBWD6Q4V339 395 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 FSCBQ5H9T9 825 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 CBWD3Q5JTY5 395 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 CBWD5Q5RIA9 395 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 NADSYN1Q6IA69 706 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 PMF1Q6P1K2 205 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 LRRC69Q6ZNQ3 347 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 KANSL1Q7Z3B3 1105 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 MMAAQ8IVH4 418 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 MFN1Q8IWA4 741 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 DHX40Q8IX18 779 aaKnown RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 OXR1Q8N573 874 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 EID2Q8N6I1 236 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 UBR7Q8N806 425 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 MFSD2AQ8NA29 543 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 HJURPQ8NCD3 748 aaPredicted RBP10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 PIP4K2CQ8TBX8 421 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 RFFLQ8WZ73 363 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 HSFY1Q96LI6 401 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 KDM4CQ9H3R0 1056 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 STIM2Q9P246 746 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ERVW-1Q9UQF0 538 aa10.21□□□□□ -0.77
TRAFD1-207ENST00000550051 ITIH6Q6UXX5 1313 aa10.21□□□□□ -0.78
TRAFD1-207ENST00000550051 EDDM13A0A1B0GTR0 161 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 CBX4O00257 560 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 RNASEH2AO75792 299 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 FBXO21O94952 628 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 LTFP02788 710 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 FYNP06241 537 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 LCP1P13796 627 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 CD19P15391 556 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 CKMT2P17540 419 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 TBXAS1P24557 533 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 NUDT1P36639 197 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 RPL34P49207 117 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 NXPH1P58417 271 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 RPS24P62847 133 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 ECT2LQ008S8 904 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 OVGP1Q12889 678 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 BNIP3Q12983 259 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 DNAJC3Q13217 504 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC12A1Q13621 1099 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 PKP1Q13835 747 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC45A4Q5BKX6 768 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 MS4A13Q5J8X5 152 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SFMBT2Q5VUG0 894 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 KRBA2Q6ZNG9 492 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SND1Q7KZF4 910 aaKnown RBP eCLIP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 BEND5Q7L4P6 421 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 IQCHQ86VS3 1027 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 AADATQ8N5Z0 425 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SNIP1Q8TAD8 396 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 TFAP2BQ92481 460 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 FGF11Q92914 225 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 PTPRN2Q92932 1015 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 FAM131CQ96AQ9 280 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 MYEOVQ96EZ4 313 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SLC39A13Q96H72 371 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SERAC1Q96JX3 654 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 FCRL2Q96LA5 508 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 PRICKLE1Q96MT3 831 aaPredicted RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 AASDHPPTQ9NRN7 309 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 SLCO3A1Q9UIG8 710 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 TLR6Q9Y2C9 796 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 RAI2Q9Y5P3 530 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 AK5Q9Y6K8 562 aa10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
TRAFD1-207ENST00000550051 TYW5A2RUC4 315 aaKnown RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 TTC34A8MYJ7 566 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 RNF225M0QZC1 329 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 PMM2O15305 246 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 C1QL1O75973 258 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 MOCS3O95396 460 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 ADH1BP00325 375 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 ACP1P24666 158 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 EPHA8P29322 1005 aaPredicted RBP10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 PLK1P53350 603 aa10.19□□□□□ -0.78
TRAFD1-207ENST00000550051 ADPRHP54922 357 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms