RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 SIK3Q9Y2K2 1263 aa6.9□□□□□ -1.3
COX6A1-202ENST00000549525 STXBP5LQ9Y2K9 1186 aa6.9□□□□□ -1.3
COX6A1-202ENST00000549525 PCDHB4Q9Y5E5 795 aa6.9□□□□□ -1.3
COX6A1-202ENST00000549525 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 LCHNA4D1U4 455 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 EFCAB8A8MWE9 144 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 TEX33O43247 280 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 NPHS1O60500 1241 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SEMA7AO75326 666 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CPP00450 1065 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CYBBP04839 570 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ITGB1P05556 798 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 WEE2P0C1S8 567 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 VDRP11473 427 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MYOGP15173 224 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PTPN1P18031 435 aaKnown RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CD58P19256 250 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MCM3P25205 808 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 KLRC2P26717 231 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CASP14P31944 242 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SOX5P35711 763 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 BRCC3P46736 316 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PDE6CP51160 858 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 GPR17Q13304 367 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PLD1Q13393 1074 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 DRAP1Q14919 205 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SPA17Q15506 151 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MEA1Q16626 185 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ARHGAP44Q17R89 818 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ACBD5Q5T8D3 534 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SFMBT2Q5VUG0 894 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SLC8B1Q6J4K2 584 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 TMEM270Q6UE05 265 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 VSTM1Q6UX27 236 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SCARA5Q6ZMJ2 495 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ATG14Q6ZNE5 492 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CCDC149Q6ZUS6 474 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 RRAGAQ7L523 313 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SPATA2LQ8IUW3 424 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 TMEM139Q8IV31 216 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PPIL6Q8IXY8 311 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 RNF168Q8IYW5 571 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ELMOD1Q8N336 334 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 LZTR1Q8N653 840 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CEP112Q8N8E3 955 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 B3GALNT2Q8NCR0 500 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ZNF461Q8TAF7 563 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MYCBPAPQ8TBZ2 947 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SPPL2BQ8TCT7 592 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 SHC3Q92529 594 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 RABGGTAQ92696 567 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ZNF669Q96BR6 464 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 RPGRIP1Q96KN7 1286 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ZNF518BQ9C0D4 1074 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ELOVL4Q9GZR5 314 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ZBP1Q9H171 429 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CXCL16Q9H2A7 254 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 PLEKHA4Q9H4M7 779 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 RXFP1Q9HBX9 757 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 APOBEC3GQ9HC16 384 aaKnown RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 ALG13Q9NP73 1137 aaKnown RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MARCH5Q9NX47 278 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 TRMT1Q9NXH9 659 aaKnown RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 AIPL1Q9NZN9 384 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MTRRQ9UBK8 725 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 DNAI1Q9UI46 699 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 MTUS1Q9ULD2 1270 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 L1RE1Q9UN81 338 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 CNTN6Q9UQ52 1028 aa6.89□□□□□ -1.31
COX6A1-202ENST00000549525 EPN1Q9Y6I3 576 aaPredicted RBP6.89□□□□□ -1.31
COX6A1-202ENST00000549525 TRIP11Q15643 1979 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 F8VZ95 297 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 ATP8B1O43520 1251 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 GFPT2O94808 682 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 GLUD1P00367 558 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 GYPCP04921 128 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 PDGFRBP09619 1106 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 TMEM253P0C7T8 217 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 LINC00271P0C7V0 271 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 LCP1P13796 627 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 CD19P15391 556 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 POU3F3P20264 500 aaPredicted RBP6.88□□□□□ -1.31
COX6A1-202ENST00000549525 TKTP29401 623 aaKnown RBP6.88□□□□□ -1.31
COX6A1-202ENST00000549525 OR1D2P34982 312 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 PBX3P40426 434 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 RAP1GAPP47736 663 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 ALDH1A3P47895 512 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 MAPKAPK2P49137 400 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 NDST1P52848 882 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 EPHB3P54753 998 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 ADKP55263 362 aaKnown RBP6.88□□□□□ -1.31
COX6A1-202ENST00000549525 CDH8P55286 799 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 RPL10AP62906 217 aaKnown RBP6.88□□□□□ -1.31
COX6A1-202ENST00000549525 MAP4K2Q12851 820 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 VEPH1Q14D04 833 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 CNGA2Q16280 664 aa6.88□□□□□ -1.31
COX6A1-202ENST00000549525 CFAP221Q4G0U5 840 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms