RNA–Protein interactions for RNA: ENST00000548868.5

SCRN3-212, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-212ENST00000548868 CHST9Q7L1S5 443 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 LZTR1Q8N653 840 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 PQLC3Q8N755 202 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 RTL3Q8N8U3 475 aaKnown RBP11.58□□□□□ -0.55
SCRN3-212ENST00000548868 TTC13Q8NBP0 860 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 IGSF8Q969P0 613 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 NXPE3Q969Y0 559 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 TMA16Q96EY4 203 aaKnown RBP11.58□□□□□ -0.55
SCRN3-212ENST00000548868 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 PRICKLE1Q96MT3 831 aaPredicted RBP11.58□□□□□ -0.55
SCRN3-212ENST00000548868 HEMGNQ9BXL5 484 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 TMEM248Q9NWD8 314 aa11.58□□□□□ -0.55
SCRN3-212ENST00000548868 DUS2Q9NX74 493 aaKnown RBP11.58□□□□□ -0.55
SCRN3-212ENST00000548868 A0A1B0GVM2 712 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 TCAF2A6NFQ2 919 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 ANHXE9PGG2 379 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 APOC4-APOC2K7ER74 178 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 SCAMP3O14828 347 aaKnown RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 ERLIN1O75477 346 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 CLDN11O75508 207 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 APOC2P02655 101 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 C7P10643 843 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 PSMC3P17980 439 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 MAPKAPK2P49137 400 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 HTR4Q13639 388 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 PAFAH1B3Q15102 231 aaKnown RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 NCBP2-AS2Q69YL0 99 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 PTCRAQ6ISU1 281 aaPredicted RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 BZW1Q7L1Q6 419 aaKnown RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 NLRP14Q86W24 1093 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 YAF2Q8IY57 180 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 ZDHHC14Q8IZN3 488 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 PLD5Q8N7P1 536 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 ZNF557Q8N988 423 aaPredicted RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 MS4A14Q96JA4 679 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 LRRC3BQ96PB8 259 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 HERPUD2Q9BSE4 406 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 FRMD8P1Q9BZ68 369 aaPredicted RBP11.58□□□□□ -0.56
SCRN3-212ENST00000548868 SPHK2Q9NRA0 654 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 MPP6Q9NZW5 540 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 MARK1Q9P0L2 795 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 RAD54BQ9Y620 910 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 WNT6Q9Y6F9 365 aa11.58□□□□□ -0.56
SCRN3-212ENST00000548868 SHROOM3Q8TF72 1996 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 GOLGA6L10A0A0M3HER8 536 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 TRDMT1O14717 391 aaKnown RBP11.57□□□□□ -0.56
SCRN3-212ENST00000548868 TSPAN3O60637 253 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 CNTN5O94779 1100 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 NFATC1O95644 943 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 MCM3P25205 808 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 NR2C2P49116 596 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 RPS24P62847 133 aaKnown RBP11.57□□□□□ -0.56
SCRN3-212ENST00000548868 BRD3Q15059 726 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 LLGL1Q15334 1064 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 EML3Q32P44 896 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 RNF43Q68DV7 783 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 PARM1Q6UWI2 310 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 ZNF572Q7Z3I7 529 aaPredicted RBP11.57□□□□□ -0.56
SCRN3-212ENST00000548868 ADGRG2Q8IZP9 1017 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 CEP112Q8N8E3 955 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 DDI1Q8WTU0 396 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 P3H4Q92791 437 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 FGF14Q92915 247 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 IRF7Q92985 503 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 ATP2A3Q93084 1043 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 MYEOVQ96EZ4 313 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 KXD1Q9BQD3 176 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 FAM83CQ9BQN1 747 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 ETNK2Q9NVF9 386 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 NYNRINQ9P2P1 1898 aaKnown RBP11.57□□□□□ -0.56
SCRN3-212ENST00000548868 MIA3Q5JRA6 1907 aa11.57□□□□□ -0.56
SCRN3-212ENST00000548868 C2CD4DB7Z1M9 353 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 CCDC188H7C350 402 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 CHADO15335 359 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 TBL1XO60907 577 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 LUC7L3O95232 432 aaKnown RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 ADH1CP00326 375 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 PENKP01210 267 aaPredicted RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 IRAK1P51617 712 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 NDST2P52849 883 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 VCPP55072 806 aaKnown RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 DYNLT1P63172 113 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 ADCY2Q08462 1091 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 SIX1Q15475 284 aaPredicted RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 AAK1Q2M2I8 961 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 ALFQ53S48 1182 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 C6orf118Q5T5N4 469 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 TPGS1Q6ZTW0 290 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 KIAA1549LQ6ZVL6 1849 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 TICRRQ7Z2Z1 1910 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 SETD3Q86TU7 594 aaPredicted RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 CCDC117Q8IWD4 279 aaPredicted RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 UMODL1-AS1Q8N2C9 162 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 RPGRIP1Q96KN7 1286 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 TRMT61BQ9BVS5 477 aaKnown RBP11.56□□□□□ -0.56
SCRN3-212ENST00000548868 LINC00597Q9H2U6 94 aa11.56□□□□□ -0.56
SCRN3-212ENST00000548868 ARFGAP3Q9NP61 516 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms