RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 A0A0A0MRY4 1105 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CAPN8A6NHC0 703 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 ZBTB24O43167 697 aaPredicted RBP14.5□□□□□ -0.09
CACNB3-209ENST00000548860 KIF1CO43896 1103 aaKnown RBP14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CSE1LP55060 971 aaKnown RBP14.5□□□□□ -0.09
CACNB3-209ENST00000548860 FUT11Q495W5 492 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 NOMO2Q5JPE7 1267 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 PPM1LQ5SGD2 360 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 SCIMPQ6UWF3 145 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 PHTF2Q8N3S3 785 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 ATPAF2Q8N5M1 289 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 ANKLE1Q8NAG6 615 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 MIPOL1Q8TD10 442 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CMTM5Q96DZ9 223 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CERS2Q96G23 380 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 SPATA13Q96N96 652 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 MPP6Q9NZW5 540 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 SFMBT1Q9UHJ3 866 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 UBQLN1Q9UMX0 589 aaKnown RBP14.5□□□□□ -0.09
CACNB3-209ENST00000548860 PCDHGC3Q9UN70 934 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 TEX264Q9Y6I9 313 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 WNK3Q9BYP7 1800 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 PMM2O15305 246 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CDH13P55290 713 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 MTHFD1LQ6UB35 978 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 CAAP1Q9H8G2 361 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 POPDC2Q9HBU9 364 aa14.5□□□□□ -0.09
CACNB3-209ENST00000548860 MYH9P35579 1960 aaKnown RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 KIF3CO14782 793 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 TSPAN1O60635 241 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 GP5P40197 560 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ABL2P42684 1182 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ZNF484Q5JVG2 852 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 LCLAT1Q6UWP7 414 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 HOMEZQ8IX15 550 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 DCBLD1Q8N8Z6 715 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 BLOC1S5Q8TDH9 187 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ATP6V1E2Q96A05 226 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 LHX5Q9H2C1 402 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 FZD8Q9H461 694 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ARHGAP26Q9UNA1 814 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 LRCH1Q9Y2L9 728 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 FARP1Q9Y4F1 1045 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 SNX13Q9Y5W8 968 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ADGRA2Q96PE1 1338 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 KLHL2O95198 593 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 SERPINE1P05121 402 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 OR4Q2P0C623 313 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 RANBP1P43487 201 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 PARP6Q2NL67 630 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 ZNF470Q6ECI4 717 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 SLC27A1Q6PCB7 646 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 FAM43BQ6ZT52 329 aaPredicted RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 FASTKD5Q7L8L6 764 aaKnown RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 DTNAQ9Y4J8 743 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 NUMBLQ9Y6R0 609 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 SCN9AQ15858 1988 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 SUPT3HO75486 399 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 EEF1B2P24534 225 aaKnown RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 NPAS2Q99743 824 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 WDR83Q9BRX9 315 aaKnown RBP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 C20orf27Q9GZN8 174 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 CCDC68Q9H2F9 335 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 LRRC40Q9H9A6 602 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 COG4Q9H9E3 785 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 PPCSQ9HAB8 311 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 NMRAL1Q9HBL8 299 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 RBM22Q9NW64 420 aaKnown RBP eCLIP14.49□□□□□ -0.09
CACNB3-209ENST00000548860 KCNK4Q9NYG8 393 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 OR12D3Q9UGF7 316 aa14.49□□□□□ -0.09
CACNB3-209ENST00000548860 KNL1Q8NG31 2342 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 TMEM233B4DJY2 109 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 TREHO43280 583 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 C2P06681 752 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 PEX2P28328 305 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 YWHAHQ04917 246 aaPredicted RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 PITRM1Q5JRX3 1037 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 METTL23Q86XA0 190 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 DENND6AQ8IWF6 608 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ZNF567Q8N184 647 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 PLD6Q8N2A8 252 aaKnown RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 EFHBQ8N7U6 833 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ARHGEF38Q9NXL2 777 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 LTBP4Q8N2S1 1624 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 OAS1P00973 400 aaKnown RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 DLDP09622 509 aaKnown RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 CHRNA4P43681 627 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 BRCC3P46736 316 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 SCNN1GP51170 649 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 SNAPC2Q13487 334 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ACVR2BQ13705 512 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 PRKD1Q15139 912 aaPredicted RBP14.48□□□□□ -0.09
CACNB3-209ENST00000548860 AGKQ53H12 422 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 C9orf131Q5VYM1 1079 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ARMC3Q5W041 872 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 ARHGAP17Q68EM7 881 aa14.48□□□□□ -0.09
CACNB3-209ENST00000548860 B3GALNT2Q8NCR0 500 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms