RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 PITX1P78337 314 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SHC2P98077 582 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CDK17Q00537 523 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PTK2Q05397 1052 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SEMA3BQ13214 749 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PDCLQ13371 301 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CDH18Q13634 790 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 FSCBQ5H9T9 825 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 OR6B2Q6IFH4 312 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 TREML4Q6UXN2 200 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PIP4P1Q86T03 277 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CHSY1Q86X52 802 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 DHX40Q8IX18 779 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 DEFB106AQ8N104 65 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 WDTC1Q8N5D0 677 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF557Q8N988 423 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 DNASE2BQ8WZ79 361 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 HPS1Q92902 700 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 TTC17Q96AE7 1141 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SLC39A13Q96H72 371 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PPP1R13BQ96KQ4 1090 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PRICKLE1Q96MT3 831 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 CAMK1GQ96NX5 476 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 TRIM62Q9BVG3 475 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PDCL3Q9H2J4 239 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 C6orf106Q9H6K1 298 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SYNCQ9H7C4 482 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PLCB1Q9NQ66 1216 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 KIAA1522Q9P206 1035 aaPredicted RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 SLC12A6Q9UHW9 1150 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 DNAJC12Q9UKB3 198 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 INTS6Q9UL03 887 aaKnown RBP6.94□□□□□ -1.3
SCAF11-211ENST00000547950 PCDHB9Q9Y5E1 797 aa6.94□□□□□ -1.3
SCAF11-211ENST00000547950 A0A1B0GVT2 93 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 TTC34A8MYJ7 566 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 KCNU1A8MYU2 1149 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 C1QTNF9BB2RNN3 333 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 F5H5T6 163 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 FOXN3O00409 490 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 KCNK3O14649 394 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 RNASEH1O60930 286 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SIN3BO75182 1162 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 LUC7L3O95232 432 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 MOCS3O95396 460 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SEMA4FO95754 770 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 IGLV3-19P01714 112 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 C1QTNF9P0C862 333 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 PNMA6AP0CW24 399 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 ABCB4P21439 1286 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 RDXP35241 583 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 RNASE9P60153 205 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 FAM193AP78312 1265 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 GRIK2Q13002 908 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 NME3Q13232 169 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 NNTQ13423 1086 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 MEA1Q16626 185 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 DPCR1Q3MIW9 517 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 VWA3BQ502W6 1294 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 PITRM1Q5JRX3 1037 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 EFHC1Q5JVL4 640 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 RNF219Q5W0B1 726 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 C11orf57Q6ZUT1 292 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 BEND5Q7L4P6 421 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SLC47A2Q86VL8 602 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 CIR1Q86X95 450 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 MMAAQ8IVH4 418 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 FAM114A1Q8IWE2 563 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 APCDD1Q8J025 514 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 ATP6V0D2Q8N8Y2 350 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 C1orf131Q8NDD1 294 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SETD7Q8WTS6 366 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SHC3Q92529 594 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 LMLNQ96KR4 655 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 BTN2A3PQ96KV6 586 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 RPL10LQ96L21 214 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 CPXM1Q96SM3 734 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SCNM1Q9BWG6 230 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 BTBD1Q9H0C5 482 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 NDST4Q9H3R1 872 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 CLSTN2Q9H4D0 955 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 GAREM1Q9H706 876 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 IL21RQ9HBE5 538 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SIX2Q9NPC8 291 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 ATP13A2Q9NQ11 1180 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 DNAAF2Q9NVR5 837 aaKnown RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 DDIT4Q9NX09 232 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 FBXL12Q9NXK8 326 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 SLCO3A1Q9UIG8 710 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 AJAP1Q9UKB5 411 aaPredicted RBP6.93□□□□□ -1.3
SCAF11-211ENST00000547950 PCDHGC3Q9UN70 934 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 ERVW-1Q9UQF0 538 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 NCKAP1Q9Y2A7 1128 aa6.93□□□□□ -1.3
SCAF11-211ENST00000547950 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 GTPBP10A4D1E9 387 aaKnown RBP6.92□□□□□ -1.3
SCAF11-211ENST00000547950 UPK3BL1B0FP48 263 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms