RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 CLDN5O00501 218 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 DYNC1I1O14576 645 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 KCNK3O14649 394 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 PPP1R12AO14974 1030 aaPredicted RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 GJB6O95452 261 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 ZBED1O96006 694 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 TUBBP07437 444 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 KRT7P08729 469 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 ZDHHC11BP0C7U3 371 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 TNFRSF8P28908 595 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 PAFAH1B1P43034 410 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 GLUD2P49448 558 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 TKTL1P51854 596 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 HDAC4P56524 1084 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 YWHAZP63104 245 aaKnown RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 SLC25A52Q3SY17 297 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 SLC39A12Q504Y0 691 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 SNX30Q5VWJ9 437 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 DRICH1Q6PGQ1 229 aaPredicted RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 RSPO2Q6UXX9 243 aaPredicted RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 ZNF365Q70YC5 407 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RTL10Q7L3V2 364 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 GPRIN1Q7Z2K8 1008 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 CPNE8Q86YQ8 564 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 HERC6Q8IVU3 1022 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 EIF1ADQ8N9N8 165 aaKnown RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 CLEC4CQ8WTT0 213 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 OVCA2Q8WZ82 227 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 NTAN1Q96AB6 310 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 FAF2Q96CS3 445 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RBM41Q96IZ5 413 aaKnown RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 SCYL1Q96KG9 808 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 KCNK16Q96T55 309 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RAD9AQ99638 391 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 ZBP1Q9H171 429 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RSPH9Q9H1X1 276 aaPredicted RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 SLITRK6Q9H5Y7 841 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 SYNCQ9H7C4 482 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 POPDC2Q9HBU9 364 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 SPG21Q9NZD8 308 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RCOR3Q9P2K3 495 aaPredicted RBP8.76□□□□□ -1.01
VPS29-203ENST00000546588 PCYOX1Q9UHG3 505 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 PFDN2Q9UHV9 154 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 RAB21Q9UL25 225 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 SCML2Q9UQR0 700 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 NOTCH4Q99466 2003 aa8.76□□□□□ -1.01
VPS29-203ENST00000546588 DENND4AQ7Z401 1863 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 A0A0A0MRY4 1105 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 WDR27A2RRH5 827 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 B2RBV5 119 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 COQ9O75208 318 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ECEL1O95672 775 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 LTFP02788 710 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ACRP10323 421 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CTSAP10619 480 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 HAPLN1P10915 354 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 PYGMP11217 842 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ATF2P15336 505 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 TCF4P15884 667 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 PDGFRAP16234 1089 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 PSMA2P25787 234 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 SDC4P31431 198 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CXCR5P32302 372 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CD151P48509 253 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 RGS7P49802 495 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ZNF135P52742 658 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 SLC5A3P53794 718 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 MAP3K7CLP57077 242 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ROR1Q01973 937 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 UBE3AQ05086 875 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 BTG3Q14201 252 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 PSMD5Q16401 504 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 DPYSL2Q16555 572 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CTXN3Q4LDR2 81 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 BOLA3Q53S33 107 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 SEL1L2Q5TEA6 688 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 OR6B2Q6IFH4 312 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CC2D1AQ6P1N0 951 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 MSANTD2Q6P1R3 559 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 WDR93Q6P2C0 686 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 C6orf15Q6UXA7 325 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 SLC13A5Q86YT5 568 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 SPATA2LQ8IUW3 424 aaPredicted RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 RCOR2Q8IZ40 523 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 SIX6OS1Q8N1H7 587 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 EMC1Q8N766 993 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 RXFP2Q8WXD0 754 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ANKRD7Q92527 254 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 GOLGA1Q92805 767 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 TRMT2BQ96GJ1 504 aaKnown RBP8.75□□□□□ -1.01
VPS29-203ENST00000546588 MYRFLQ96LU7 910 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 SLITRK1Q96PX8 696 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 PEBP4Q96S96 227 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 CLSTN3Q9BQT9 956 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 ULBP1Q9BZM6 244 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 FBXO44Q9H4M3 255 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 LRRC19Q9H756 370 aa8.75□□□□□ -1.01
VPS29-203ENST00000546588 LRRC4Q9HBW1 653 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms