RNA–Protein interactions for RNA: ENST00000545620.5

SMAD5-212, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD5, Length 6,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-212ENST00000545620 OTUD4Q01804 1114 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 TP53BP2Q13625 1128 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RNASEH2BQ5TBB1 312 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 LHX8Q68G74 356 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ERICH5Q6P6B1 374 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CAND1Q86VP6 1230 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ARHGAP24Q8N264 748 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CATSPER1Q8NEC5 780 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 BBS1Q8NFJ9 593 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 DEPTORQ8TB45 409 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 FAM81AQ8TBF8 368 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 EXT2Q93063 718 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CHMP6Q96FZ7 201 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 TIPINQ9BVW5 301 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 HESX1Q9UBX0 185 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PCSK1NQ9UHG2 260 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 TSPAN16Q9UKR8 245 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 APOBEC2Q9Y235 224 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PMF1-BGLAPU3KQ54 211 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SCN8AQ9UQD0 1980 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RAB19A4D1S5 217 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PSMD11O00231 422 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SULT1B1O43704 296 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PHF2O75151 1096 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PDGFRBP09619 1106 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 IFI30P13284 250 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 NPR2P20594 1047 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PDHA2P29803 388 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 MTTPP55157 894 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 MYO1EQ12965 1108 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PDIA2Q13087 525 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SHCBP1Q8NEM2 672 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ZNF597Q96LX8 424 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 VN1R3Q9BXE9 311 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ERAP1Q9NZ08 941 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SPASTQ9UBP0 616 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 MYBPHLA2RUH7 354 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SEC24DO94855 1032 aaPredicted RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 NPPAP01160 153 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 DDX6P26196 483 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RFC5P40937 340 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 MFAP3P55082 362 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 FCHO2Q0JRZ9 810 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 MTA1Q13330 715 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 DPYSL3Q14195 570 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 LRRC36Q1X8D7 754 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ARHGAP36Q6ZRI8 547 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CTAGE3PQ8IX95 158 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CMASQ8NFW8 434 aaPredicted RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 HASPINQ8TF76 798 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 FAM129BQ96TA1 746 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 NINJ2Q9NZG7 142 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CNTN3Q9P232 1028 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 NOD1Q9Y239 953 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CSMD1Q96PZ7 3565 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RGSL1A5PLK6 1076 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 TRIM43BA6NCK2 446 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PRR23D1E9PI22 279 aaPredicted RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RNF103O00237 685 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 CASC3O15234 703 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 DNAJB6O75190 326 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PRR23D2P0DMB1 279 aaPredicted RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 DARSP14868 501 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 JUNDP17535 347 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ACTN2P35609 894 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SCNN1BP51168 640 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 EPHB4P54760 987 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 LBRQ14739 615 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PTPRRQ15256 657 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 FAXCQ5TGI0 409 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 C9orf57Q5W0N0 161 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 RD3Q7Z3Z2 195 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SYNPOQ8N3V7 929 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 PDCD10Q9BUL8 212 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 WDR6Q9NNW5 1121 aaKnown RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 AVENQ9NQS1 362 aaPredicted RBP4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ADAM22Q9P0K1 906 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 SPATA2Q9UM82 520 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 USTQ9Y2C2 406 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 ACTL7AQ9Y615 435 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 LTBP2Q14767 1821 aa4.88□□□□□ -1.63
SMAD5-212ENST00000545620 C2orf71A6NGG8 1288 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 AGRPO00253 132 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 CHUKO15111 745 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 AHCYL1O43865 530 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 SLC25A27O95847 323 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 GPR15P49685 360 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 CSNK2BP67870 215 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 MRPS5P82675 430 aaKnown RBP4.87□□□□□ -1.63
SMAD5-212ENST00000545620 CYLC2Q14093 348 aaPredicted RBP4.87□□□□□ -1.63
SMAD5-212ENST00000545620 LRRC14Q15048 493 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 CYTH1Q15438 398 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 IQCF2Q8IXL9 164 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 NT5C3BQ969T7 300 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 ZNF778Q96MU6 729 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 NIF3L1Q9GZT8 377 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 AMFRQ9UKV5 643 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 A0A1B0GW55 424 aa4.87□□□□□ -1.63
SMAD5-212ENST00000545620 OAS1P00973 400 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms