RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 PREPP48147 710 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 GFRA1P56159 465 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 ARPP19P56211 112 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CYP4F2P78329 520 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 PRKCEQ02156 737 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 MAP4K2Q12851 820 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 SRSF6Q13247 344 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 SF1Q15637 639 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 INF2Q27J81 1249 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 Q4G0T1 1027 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 TTC38Q5R3I4 469 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 BORAQ6PGQ7 559 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 FGD2Q7Z6J4 655 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CDH24Q86UP0 819 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 SFTPA1Q8IWL2 248 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 SAP25Q8TEE9 199 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 USP13Q92995 863 aaPredicted RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 ATP2A3Q93084 1043 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 TCTN2Q96GX1 697 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CCDC140Q96MF4 163 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 HEXIM2Q96MH2 286 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 ACAP3Q96P50 834 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 EIF2AQ9BY44 585 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 IFT122Q9HBG6 1241 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 CD93Q9NPY3 652 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 ZNF71Q9NQZ8 489 aaPredicted RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 NRBP2Q9NSY0 501 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 WSB2Q9NYS7 404 aaPredicted RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 PRR13Q9NZ81 148 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 NDOR1Q9UHB4 597 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 AFF4Q9UHB7 1163 aaKnown RBP7.16□□□□□ -1.26
LDHA-223ENST00000545215 SATB2Q9UPW6 733 aa7.16□□□□□ -1.26
LDHA-223ENST00000545215 ARID2Q68CP9 1835 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KNL1Q8NG31 2342 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 HEATR9A2RTY3 570 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 MSH4O15457 936 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 NEMFO60524 1076 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 CCNT1O60563 726 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 RTN2O75298 545 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 CSO75390 466 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 NPTXRO95502 500 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 YEATS4O95619 227 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 SCG5P05408 212 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 CD1EP15812 388 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 IGFBP6P24592 240 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 GABRR2P28476 465 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 PRPHP41219 470 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 CTSKP43235 329 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 JAK3P52333 1124 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KRT85P78386 507 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 GRIN1Q05586 938 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KLRB1Q12918 225 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KCNT1Q5JUK3 1230 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 LRCH2Q5VUJ6 765 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 ARL6IP4Q66PJ3 421 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 SP5Q6BEB4 398 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 Q6ZS46 218 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 PRIMA1Q86XR5 153 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 RAVER1Q8IY67 606 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 AHI1Q8N157 1196 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 ATL2Q8NHH9 583 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 C9orf43Q8TAL5 461 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 IPO4Q8TEX9 1081 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 LEO1Q8WVC0 666 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 OSCP1Q8WVF1 389 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KCTD13Q8WZ19 329 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 PTPRN2Q92932 1015 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 LENG9Q96B70 501 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 C1orf159Q96HA4 380 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 RIT2Q99578 217 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 GPR174Q9BXC1 333 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 TEKT3Q9BXF9 490 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 RAB34Q9BZG1 259 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 PRDM14Q9GZV8 571 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 SCAND2PQ9GZW5 306 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 SEMA6CQ9H3T2 930 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 KIF9Q9HAQ2 790 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 ZDHHC4Q9NPG8 344 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 TDP1Q9NUW8 608 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 DUS2Q9NX74 493 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 DDX25Q9UHL0 483 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 ERRFI1Q9UJM3 462 aaPredicted RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 PCDHGA8Q9Y5G5 932 aa7.15□□□□□ -1.26
LDHA-223ENST00000545215 TNPO3Q9Y5L0 923 aaKnown RBP7.15□□□□□ -1.26
LDHA-223ENST00000545215 MYH9P35579 1960 aaKnown RBP7.14□□□□□ -1.27
LDHA-223ENST00000545215 A0A1W2PQF6 199 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 TMEM189-UBE2V1I3L0A0 370 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 SLC26A4O43511 780 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 DTNBO60941 627 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 ASLP04424 464 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 RAB6AP20340 208 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 AKAP5P24588 427 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 HOXC12P31275 282 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 SFNP31947 248 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 TNFRSF4P43489 277 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 EPHB3P54753 998 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 SNRPNP63162 240 aaKnown RBP7.14□□□□□ -1.27
LDHA-223ENST00000545215 CYP4F8P98187 520 aa7.14□□□□□ -1.27
LDHA-223ENST00000545215 PLD1Q13393 1074 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms