RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SUN2Q9UH99 717 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SLC12A6Q9UHW9 1150 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SLCO3A1Q9UIG8 710 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 TMEM59LQ9UK28 342 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ERVW-1Q9UQF0 538 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 HS3ST4Q9Y661 456 aa13.54□□□□□ -0.24
TNFRSF1A-215ENST00000543359 TYW5A2RUC4 315 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 METTL12A8MUP2 240 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 C10orf142B7Z368 130 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 F5H5T6 163 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 H0Y626 953 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 M0QYT0 321 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 GIPC1O14908 333 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SIN3BO75182 1162 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 NDUFS2O75306 463 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 PAGE1O75459 146 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ASLP04424 464 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CYP1A1P04798 512 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SRPRAP08240 638 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ABCB4P21439 1286 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 MZF1P28698 734 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FLT3P36888 993 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 PLK1P53350 603 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 POLR2FP61218 127 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FMO1Q01740 532 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CDR2Q01850 454 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 MYL5Q02045 173 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CENPCQ03188 943 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ZBTB16Q05516 673 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 NME3Q13232 169 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CDH18Q13634 790 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 STX1AQ16623 288 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ERICH1Q86X53 443 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CCAR2Q8N163 923 aaKnown RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 OR52K2Q8NGK3 314 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CPA5Q8WXQ8 436 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FAM129BQ96TA1 746 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SYNCQ9H7C4 482 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FBRSQ9HAH7 460 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FAM207AQ9NSI2 230 aaPredicted RBP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 RRN3Q9NYV6 651 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CEP83Q9Y592 693 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 OR51B4Q9Y5P0 310 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 SLCO1B1Q9Y6L6 691 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 ITIH6Q6UXX5 1313 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 CABIN1Q9Y6J0 2220 aa13.53□□□□□ -0.24
TNFRSF1A-215ENST00000543359 LAMA5O15230 3695 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 A0A1B0GVM2 712 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM170AA1A519 330 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TARSL2A2RTX5 802 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TCAF2A6NFQ2 919 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 LGALS16A8MUM7 142 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TTC34A8MYJ7 566 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ARHGAP33O14559 1287 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GJB3O75712 270 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GFPT2O94808 682 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MBD3O95983 291 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CFIP05156 583 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ACSL1P33121 698 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SOX5P35711 763 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RNASE9P60153 205 aaKnown RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ECT2LQ008S8 904 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GFPT1Q06210 699 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SLC12A1Q13621 1099 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SYCP1Q15431 976 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SLC25A52Q3SY17 297 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 WDR45BQ5MNZ6 344 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CCDC183Q5T5S1 534 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TTC39BQ5VTQ0 682 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DCAF12L1Q5VU92 463 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DAB2IPQ5VWQ8 1189 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ARCQ7LC44 396 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PIP4P1Q86T03 277 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZNF677Q86XU0 584 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TBCBQ99426 244 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 C6orf106Q9H6K1 298 aaPredicted RBP13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 VANGL2Q9ULK5 521 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TBC1D30Q9Y2I9 924 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DOCK4Q8N1I0 1966 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 IGF2RP11717 2491 aa13.52□□□□□ -0.25
TNFRSF1A-215ENST00000543359 UPK3BL1B0FP48 263 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 UPK3BL2E5RIL1 263 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GOLGA6L22H0YM25 854 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CNTN5O94779 1100 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ENDOD1O94919 500 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ACADMP11310 421 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 UNGP13051 313 aaPredicted RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PDGFRAP16234 1089 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CSRP1P21291 193 aaKnown RBP13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MMP8P22894 467 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PMLP29590 882 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GGCXP38435 758 aa13.51□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MAPK8P45983 427 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms