RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 CYB5D2Q8WUJ1 264 aa16.76■□□□□ 0.27
CIT-212ENST00000543239 MRGPRX1Q96LB2 322 aa16.76■□□□□ 0.27
CIT-212ENST00000543239 TAS2R14Q9NYV8 317 aa16.76■□□□□ 0.27
CIT-212ENST00000543239 LUC7L2Q9Y383 392 aaKnown RBP16.76■□□□□ 0.27
CIT-212ENST00000543239 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■■□□ 18.7
CIT-212ENST00000543239 PLXND1Q9Y4D7 1925 aa16.76■□□□□ 0.27
CIT-212ENST00000543239 ZNF292O60281 2723 aa16.76■□□□□ 0.27
CIT-212ENST00000543239 WDR87Q6ZQQ6 2873 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 GVINP1Q7Z2Y8 2422 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 IGLV3-10A0A075B6K4 115 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 DDX3XO00571 662 aaKnown RBP eCLIP16.75■□□□□ 0.27
CIT-212ENST00000543239 DCLK1O15075 740 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 EPN2O95208 641 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 GYPCP04921 128 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 SRPRAP08240 638 aaKnown RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 RRM1P23921 792 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 GGCXP38435 758 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 ZNF143P52747 638 aaPredicted RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 PLK1P53350 603 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 ST8SIA6P61647 398 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 ZNF177Q13360 481 aaPredicted RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 CAMK2GQ13555 558 aaPredicted RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 MAP7D1Q3KQU3 841 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 TDRD12Q587J7 1177 aaKnown RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 HGSNATQ68CP4 663 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 PMS2CLQ68D20 193 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 CXorf57Q6NSI4 855 aaKnown RBP16.75■□□□□ 0.27
CIT-212ENST00000543239 C14orf80Q86SX3 495 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 FAM172AQ8WUF8 416 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 MCEEQ96PE7 176 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 FBRSQ9HAH7 460 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 PARVAQ9NVD7 372 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 INVSQ9Y283 1065 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 TBC1D30Q9Y2I9 924 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 PCDHGA5Q9Y5G8 931 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 CKAP5Q14008 2032 aa16.75■□□□□ 0.27
CIT-212ENST00000543239 EP300Q09472 2414 aaPredicted RBP16.74■□□□□ 0.27
CIT-212ENST00000543239 DRGXA6NNA5 263 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 TMCO5BA8MYB1 307 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 E9PAM4 449 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 RTN2O75298 545 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SERPING1P05155 500 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 C7P10643 843 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SKILP12757 684 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 DESP17661 470 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 ADRA1BP35368 520 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 IRAK1P51617 712 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 HDAC4P56524 1084 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 NRG1Q02297 640 aaPredicted RBP16.74■□□□□ 0.27
CIT-212ENST00000543239 SULT2A1Q06520 285 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 TRIM14Q14142 442 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 ARID5BQ14865 1188 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SPDYCQ5MJ68 293 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SH3PXD2AQ5TCZ1 1133 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 PLEKHA7Q6IQ23 1121 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 DCUN1D2Q6PH85 259 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 VPS36Q86VN1 386 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 CPLX3Q8WVH0 158 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 RLN3Q8WXF3 142 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 NTAN1Q96AB6 310 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 TRIM11Q96F44 468 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 MYO19Q96H55 970 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 MRGPRX3Q96LB0 322 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 MKRN2Q9H000 416 aaKnown RBP16.74■□□□□ 0.27
CIT-212ENST00000543239 PRDM16Q9HAZ2 1276 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 TMPRSS4Q9NRS4 437 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SUN2Q9UH99 717 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 ERVW-1Q9UQF0 538 aa16.74■□□□□ 0.27
CIT-212ENST00000543239 SPAG17Q6Q759 2223 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 CCP110O43303 1012 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 FOXD2O60548 495 aaPredicted RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 FTLP02792 175 aaPredicted RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 MYBL1P10243 752 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 HLA-EP13747 358 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 BCKDHBP21953 392 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 TGM1P22735 817 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 CASP14P31944 242 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 COPAP53621 1224 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 RPL7AP62424 266 aaKnown RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 ECT2LQ008S8 904 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 MAMLD1Q13495 774 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 RAB6CQ53S08 254 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 RNF219Q5W0B1 726 aaPredicted RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 SPECC1LQ69YQ0 1117 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 KIAA1324Q6UXG2 1013 aaKnown RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 SLC36A4Q6YBV0 504 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 SETD3Q86TU7 594 aaPredicted RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 TMPRSS6Q8IU80 811 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 APCDD1Q8J025 514 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 PRCCQ92733 491 aaPredicted RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 ERLEC1Q96DZ1 483 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 CNPY3Q9BT09 278 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 RAB6CQ9H0N0 254 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 ISCUQ9H1K1 167 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 OSBPL2Q9H1P3 480 aa16.73■□□□□ 0.27
CIT-212ENST00000543239 PPARGC1AQ9UBK2 798 aaKnown RBP16.73■□□□□ 0.27
CIT-212ENST00000543239 SNX10Q9Y5X0 201 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms