RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 CDYLQ9Y232 598 aa4.92□□□□□ -1.62
MDM2-228ENST00000542502 RIPK3Q9Y572 518 aa4.92□□□□□ -1.62
MDM2-228ENST00000542502 ATP6V1DQ9Y5K8 247 aa4.92□□□□□ -1.62
MDM2-228ENST00000542502 SMCHD1A6NHR9 2005 aa4.92□□□□□ -1.62
MDM2-228ENST00000542502 FRMPD4Q14CM0 1322 aa4.92□□□□□ -1.62
MDM2-228ENST00000542502 KIAA1217Q5T5P2 1943 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 KIAA0100Q14667 2235 aaKnown RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 KLHL33A6NCF5 533 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 LINC00473A8K010 186 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 LAD1O00515 517 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 MEIS2O14770 477 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 FIBPO43427 364 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 XPOTO43592 962 aaKnown RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 DUSP11O75319 330 aaKnown RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 CABYRO75952 493 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 AGFG2O95081 481 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 ZRANB2O95218 330 aaKnown RBP eCLIP4.91□□□□□ -1.62
MDM2-228ENST00000542502 BAG4O95429 457 aaKnown RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 MMP1P03956 469 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 GJB1P08034 283 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CHRM2P08172 466 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CYP3A4P08684 503 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 RARBP10826 455 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 AGXTP21549 392 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CPT1AP50416 773 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 ACVR2BQ13705 512 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 NONOQ15233 471 aaKnown RBP eCLIP4.91□□□□□ -1.62
MDM2-228ENST00000542502 CLUL1Q15846 466 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CD300EQ496F6 205 aaPredicted RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 FAM102BQ5T8I3 360 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 MAP3K21Q5TCX8 1036 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 ATL3Q6DD88 541 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 NXNQ6DKJ4 435 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 PPP4R3AQ6IN85 833 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 FAM43BQ6ZT52 329 aaPredicted RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 ARMCX2Q7L311 632 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 RAB11FIP4Q86YS3 637 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 TCEAL8Q8IYN2 117 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 MYO1HQ8N1T3 1032 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 NECAB1Q8N987 351 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 PCSK9Q8NBP7 692 aaKnown RBP4.91□□□□□ -1.62
MDM2-228ENST00000542502 PDPRQ8NCN5 879 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 PIBF1Q8WXW3 757 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 JADE3Q92613 823 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 TEKT5Q96M29 485 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 RAB34Q9BZG1 259 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CPVLQ9H3G5 476 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 TBC1D22BQ9NU19 505 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 PCDHA6Q9UN73 950 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 GPR45Q9Y5Y3 372 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 MRFAP1Q9Y605 127 aa4.91□□□□□ -1.62
MDM2-228ENST00000542502 CYP3A7-CYP3A51PA0A087WV96 503 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 TBX3O15119 743 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 DKC1O60832 514 aaKnown RBP eCLIP4.9□□□□□ -1.63
MDM2-228ENST00000542502 SUN1O94901 812 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 CTDNEP1O95476 244 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 RPLP2P05387 115 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 PGK2P07205 417 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 PF4V1P10720 104 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 MTHFD1P11586 935 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 CCL5P13501 91 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 CYP3A7P24462 503 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 U2AF2P26368 475 aaKnown RBP eCLIP4.9□□□□□ -1.634e-10■■□□□ 13
MDM2-228ENST00000542502 GJB2P29033 226 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 ICAM3P32942 547 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 CIITAP33076 1130 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 ANXA11P50995 505 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 SNAP25P60880 206 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 NUCB2P80303 420 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 CNTN2Q02246 1040 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 TNFAIP2Q03169 654 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 PGM5Q15124 567 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 LLGL1Q15334 1064 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 SLC35G1Q2M3R5 365 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 DUSP28Q4G0W2 176 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 CEP55Q53EZ4 464 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 RILPL1Q5EBL4 403 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 UTP14CQ5TAP6 766 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 USP17L6PQ6QN14 398 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 SLC30A10Q6XR72 485 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 RASGRP2Q7LDG7 609 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 NEK8Q86SG6 692 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 C14orf80Q86SX3 495 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 RHOT1Q8IXI2 618 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 DIS3L2Q8IYB7 885 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 ADGRG5Q8IZF4 528 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 TRIB2Q92519 343 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 SNX19Q92543 992 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 ZNF333Q96JL9 665 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 FAM20AQ96MK3 541 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 INPP4AQ96PE3 977 aaPredicted RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 TAAR1Q96RJ0 339 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 HAPLN3Q96S86 360 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 SDF4Q9BRK5 362 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 ARHGAP39Q9C0H5 1083 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.9□□□□□ -1.63
MDM2-228ENST00000542502 VPS54Q9P1Q0 977 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 DDX20Q9UHI6 824 aaKnown RBP4.9□□□□□ -1.63
MDM2-228ENST00000542502 GABRQQ9UN88 632 aa4.9□□□□□ -1.63
MDM2-228ENST00000542502 ANKRD6Q9Y2G4 727 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms