RNA–Protein interactions for RNA: ENST00000542484.1

C2CD3-218, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-218ENST00000542484 UBE2Q2LH0YL09 131 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 CLIC1O00299 241 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 IPO5O00410 1097 aaKnown RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 GCATO75600 419 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 BCAR3O75815 825 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 GYS1P13807 737 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 WDR5P61964 334 aaKnown RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 TFF2Q03403 129 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 TRAF1Q13077 416 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 CBFBQ13951 182 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 PRKG1Q13976 671 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 KCNB1Q14721 858 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 MFSD13AQ14CX5 517 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 TPD52L1Q16890 204 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 BTBD16Q32M84 506 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 INO80DQ53TQ3 878 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 BMP2KLQ5H9B9 411 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 CCDC30Q5VVM6 783 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 AP1ARQ63HQ0 302 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 TTLL5Q6EMB2 1281 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 JMJD6Q6NYC1 403 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 NFRKBQ6P4R8 1299 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 TMEM65Q6PI78 240 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 C16orf89Q6UX73 402 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SERPINA13PQ6UXR4 307 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 RAB11FIP2Q7L804 512 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 CCDC186Q7Z3E2 898 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SCAMP5Q8TAC9 235 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 GTF3C6Q969F1 213 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SMARCE1Q969G3 411 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 MCRS1Q96EZ8 462 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 FAR2Q96K12 515 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 HS6ST2Q96MM7 605 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SH3GL3Q99963 347 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SORBS1Q9BX66 1292 aaKnown RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 ZSCAN16Q9H4T2 348 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SLITRK6Q9H5Y7 841 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 DAPP1Q9UN19 280 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 CNTN6Q9UQ52 1028 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 ZBTB1Q9Y2K1 713 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 PLB1Q6P1J6 1458 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 COL11A2P13942 1736 aaPredicted RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SUPT6HQ7KZ85 1726 aaKnown RBP4.91□□□□□ -1.62
C2CD3-218ENST00000542484 ARHGEF12Q9NZN5 1544 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 SPATA31A6Q5VVP1 1343 aa4.91□□□□□ -1.62
C2CD3-218ENST00000542484 GRIN2AQ12879 1464 aa4.9□□□□□ -1.62
C2CD3-218ENST00000542484 LINC01548A6NM66 108 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 KIF28PB7ZC32 967 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TISP43B9A030 160 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 FYB1O15117 783 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 NKX2-8O15522 239 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 LARGE1O95461 756 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 C1RP00736 705 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 NHLRC4P0CG21 123 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 MX1P20591 662 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CST5P28325 142 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 OAS2P29728 719 aaKnown RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 MNAT1P51948 309 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 RWDD2BP57060 319 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TUBA4AP68366 448 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 NEDD9Q14511 834 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CRYMQ14894 314 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 POSTNQ15063 836 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 PTPN14Q15678 1187 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 SMN1Q16637 294 aaKnown RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 AAK1Q2M2I8 961 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TTC22Q5TAA0 569 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 PRAMEF17Q5VTA0 474 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 VSTM1Q6UX27 236 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 GBP6Q6ZN66 633 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ZNF788Q6ZQV5 615 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 PTF1AQ7RTS3 328 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TADA2BQ86TJ2 420 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CHSY1Q86X52 802 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TEX11Q8IYF3 940 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 GALNT15Q8N3T1 639 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 SEMA6DQ8NFY4 1073 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 HASPINQ8TF76 798 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ZG16BQ96DA0 208 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CCDC17Q96LX7 622 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 C16orf45Q96MC5 204 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 PAGR1Q9BTK6 254 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ADGRE3Q9BY15 652 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 TMX4Q9H1E5 349 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 VPS16Q9H269 839 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 MLXIPQ9HAP2 919 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 SRP68Q9UHB9 627 aaKnown RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 ZNF215Q9UL58 517 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 C19orf53Q9UNZ5 99 aaPredicted RBP4.9□□□□□ -1.63
C2CD3-218ENST00000542484 PCDHB7Q9Y5E2 793 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 CFAP74Q9C0B2 1584 aa4.9□□□□□ -1.63
C2CD3-218ENST00000542484 POLR2AP24928 1970 aaKnown RBP4.89□□□□□ -1.63
C2CD3-218ENST00000542484 EHBP1L1Q8N3D4 1523 aa4.89□□□□□ -1.63
C2CD3-218ENST00000542484 SLC38A8A6NNN8 435 aa4.89□□□□□ -1.63
C2CD3-218ENST00000542484 EFCAB8A8MWE9 144 aa4.89□□□□□ -1.63
C2CD3-218ENST00000542484 SMIM22K7EJ46 135 aa4.89□□□□□ -1.63
C2CD3-218ENST00000542484 POLR3GO15318 223 aaPredicted RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms