RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CCP110O43303 1012 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 CBFA2T2O43439 604 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 FTLP02792 175 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 TPM3P06753 285 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 POLR2EP19388 210 aaKnown RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 MZF1P28698 734 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 CTSOP43234 321 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 ZNF143P52747 638 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 MAMLD1Q13495 774 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 PLEKHG6Q3KR16 790 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 USP39Q53GS9 565 aaKnown RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 PLEKHA7Q6IQ23 1121 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 SERPINA13PQ6UXR4 307 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 CCDC117Q8IWD4 279 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 PGBD3Q8N328 593 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 ZNF366Q8N895 744 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 FAM172AQ8WUF8 416 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 ALG14Q96F25 216 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 MAGEB5Q9BZ81 275 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 MKRN2Q9H000 416 aaKnown RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 CD93Q9NPY3 652 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 NCDNQ9UBB6 729 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 MBD1Q9UIS9 605 aaPredicted RBP17.41■□□□□ 0.38
CD9-209ENST00000540891 RAB23Q9ULC3 237 aa17.41■□□□□ 0.38
CD9-209ENST00000540891 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.41■□□□□ 0.38
CD9-209ENST00000540891 CKAP5Q14008 2032 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 E9PAM4 449 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 SERPING1P05155 500 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ATP5BP06576 529 aaKnown RBP17.4■□□□□ 0.38
CD9-209ENST00000540891 EPHX1P07099 455 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 TGM1P22735 817 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ADRA1BP35368 520 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 NUMBP49757 651 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 PLK1P53350 603 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 COPAP53621 1224 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 CDH4P55283 916 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 E2F5Q15329 346 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 FNDC3BQ53EP0 1204 aaKnown RBP17.4■□□□□ 0.38
CD9-209ENST00000540891 TDRD12Q587J7 1177 aaKnown RBP17.4■□□□□ 0.38
CD9-209ENST00000540891 SPECC1LQ69YQ0 1117 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.4■□□□□ 0.38
CD9-209ENST00000540891 VSTM4Q8IW00 320 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 CCDC185Q8N715 623 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ISCUQ9H1K1 167 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ARHGAP20Q9P2F6 1191 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ZNF212Q9UDV6 495 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 ADAMTS1Q9UHI8 967 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 PLA2G4CQ9UP65 541 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 TBC1D30Q9Y2I9 924 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 OR51B4Q9Y5P0 310 aa17.4■□□□□ 0.38
CD9-209ENST00000540891 BZW2Q9Y6E2 419 aaKnown RBP17.4■□□□□ 0.38
CD9-209ENST00000540891 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 RTN2O75298 545 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 CLDN11O75508 207 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 ASLP04424 464 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 RETP07949 1114 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 HNRNPH3P31942 346 aaKnown RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 ZNF177Q13360 481 aaPredicted RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 CAMK2GQ13555 558 aaPredicted RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 SLC12A1Q13621 1099 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 STARD3Q14849 445 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 ACBD5Q5T8D3 534 aaPredicted RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 MANEALQ5VSG8 457 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 PMS2CLQ68D20 193 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 NTAN1Q96AB6 310 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 HINFPQ9BQA5 517 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 MTG2Q9H4K7 406 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 PARD6AQ9NPB6 346 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 PARVAQ9NVD7 372 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 GMEB2Q9UKD1 530 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 NEU3Q9UQ49 428 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 ERVW-1Q9UQF0 538 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 FAM186AA6NE01 2351 aa17.39■□□□□ 0.37
CD9-209ENST00000540891 RIF1Q5UIP0 2472 aaKnown RBP17.39■□□□□ 0.37
CD9-209ENST00000540891 A0A087X0T9 212 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FAM72CH0Y354 149 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 SYNCRIPO60506 623 aaKnown RBP17.38■□□□□ 0.37
CD9-209ENST00000540891 SRGAP2O75044 1071 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FAM228BP0C875 321 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 C7P10643 843 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 NRG1Q02297 640 aaPredicted RBP17.38■□□□□ 0.37
CD9-209ENST00000540891 ZNF252P-AS1Q0IIN9 211 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 ARID5BQ14865 1188 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FAM72AQ5TYM5 149 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FAM72DQ6L9T8 149 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 DCUN1D2Q6PH85 259 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 LRRC31Q6UY01 552 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FAM72BQ86X60 149 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 OR2T3Q8NH03 318 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 LOXL4Q96JB6 756 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 FEM1AQ9BSK4 669 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 CNPY3Q9BT09 278 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 TRIM7Q9C029 511 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 OSBPL2Q9H1P3 480 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 PRSS16Q9NQE7 514 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 CNOT8Q9UFF9 292 aaKnown RBP17.38■□□□□ 0.37
CD9-209ENST00000540891 NENFQ9UMX5 172 aa17.38■□□□□ 0.37
CD9-209ENST00000540891 PLXND1Q9Y4D7 1925 aa17.37■□□□□ 0.37
CD9-209ENST00000540891 IGHV1OR15-9A0A0B4J2B8 117 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms