RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RUNX3Q13761 415 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 CCDC6Q16204 474 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 SMTNL2Q2TAL5 461 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 AASDHQ4L235 1098 aaPredicted RBP17.25■□□□□ 0.35
UBC-208ENST00000540700 KCNT1Q5JUK3 1230 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 ADGRF1Q5T601 910 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 FYB2Q5VWT5 728 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 FBXL22Q6P050 247 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 SND1Q7KZF4 910 aaKnown RBP eCLIP17.25■□□□□ 0.352e-6■□□□□ 8.1
UBC-208ENST00000540700 REXO1L1PQ8IX06 675 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 LRRC57Q8N9N7 239 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 BHMTQ93088 406 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 IGSF8Q969P0 613 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 SNRNP25Q9BV90 132 aaKnown RBP17.25■□□□□ 0.35
UBC-208ENST00000540700 TBC1D14Q9P2M4 693 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 CLEC4EQ9ULY5 219 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 ZNF510Q9Y2H8 683 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 CAPN6Q9Y6Q1 641 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 TICRRQ7Z2Z1 1910 aa17.25■□□□□ 0.35
UBC-208ENST00000540700 MACROD2A1Z1Q3 448 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 USP27XA6NNY8 438 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 SLC9A3R1O14745 358 aaPredicted RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 COMTP21964 271 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 HOXC13P31276 330 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 SLC11A2P49281 568 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 MLLT6P55198 1093 aaPredicted RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 RPS24P62847 133 aaKnown RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 KIF5AQ12840 1032 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 AUHQ13825 339 aaKnown RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 ACAP1Q15027 740 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 SF3A2Q15428 464 aaKnown RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 ATP13A4Q4VNC1 1196 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 MANEALQ5VSG8 457 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 ZNF662Q6ZS27 426 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 Q6ZS52 159 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 LONP2Q86WA8 852 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 CHSY1Q86X52 802 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 SPEM1Q8N4L4 309 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 FAM160A2Q8N612 972 aaPredicted RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 OTUB2Q96DC9 234 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 HAPLN3Q96S86 360 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 KCTD15Q96SI1 283 aaPredicted RBP17.24■□□□□ 0.35
UBC-208ENST00000540700 SIK2Q9H0K1 926 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 TRPV5Q9NQA5 729 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 PLK2Q9NYY3 685 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 MARK1Q9P0L2 795 aa17.24■□□□□ 0.35
UBC-208ENST00000540700 TRIM24O15164 1050 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 RNF8O76064 485 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 NFATC1O95644 943 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 PENKP01210 267 aaPredicted RBP17.23■□□□□ 0.35
UBC-208ENST00000540700 RARAP10276 462 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 PMLP29590 882 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 GJA4P35212 333 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 SEMA3BQ13214 749 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 RNF43Q68DV7 783 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 TXNDC11Q6PKC3 985 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 SLFN11Q7Z7L1 901 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 LGI2Q8N0V4 545 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 CFAP52Q8N1V2 620 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 WFDC5Q8TCV5 224 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 CSGALNACT1Q8TDX6 532 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 ZWILCHQ9H900 591 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 LZTFL1Q9NQ48 299 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 C2orf42Q9NWW7 574 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 VANGL2Q9ULK5 521 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 ALG6Q9Y672 507 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 IGF2RP11717 2491 aa17.23■□□□□ 0.35
UBC-208ENST00000540700 ZZEF1O43149 2961 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 E9PAM4 449 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 K7ESF4 209 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 AXIN1O15169 862 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 HOXC11O43248 304 aaPredicted RBP17.22■□□□□ 0.35
UBC-208ENST00000540700 NRDCO43847 1150 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 CNTN5O94779 1100 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 ADH5P11766 374 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 HOXD9P28356 352 aaPredicted RBP17.22■□□□□ 0.35
UBC-208ENST00000540700 CNR2P34972 360 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 SLC6A11P48066 632 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 MARCKSL1P49006 195 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 ARSEP51690 589 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 LRRC32Q14392 662 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 ITPRIPL2Q3MIP1 535 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 C5orf22Q49AR2 442 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 C11orf63Q6NUN7 778 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 SFTPA1Q8IWL2 248 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 ETFBKMTQ8IXQ9 262 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 CD101Q93033 1021 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 C1orf74Q96LT6 269 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 IRX2Q9BZI1 471 aaPredicted RBP17.22■□□□□ 0.35
UBC-208ENST00000540700 OSBPL2Q9H1P3 480 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 KLHL11Q9NVR0 708 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 SLC12A6Q9UHW9 1150 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 GUCA1BQ9UMX6 200 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
UBC-208ENST00000540700 IGLV3-10A0A075B6K4 115 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 ANTXRLA6NF34 631 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 NEDD8-MDP1E9PL57 170 aa17.21■□□□□ 0.35
UBC-208ENST00000540700 PRPSAP2O60256 369 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms