RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 SLCO3A1Q9UIG8 710 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 VANGL2Q9ULK5 521 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PCDH15Q96QU1 1955 aa13.16□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SPAARA0A1B0GVQ0 90 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TCAF2A6NFQ2 919 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 F8VZ95 297 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MID1O15344 667 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 BCAT2O15382 392 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RNASEH1O60930 286 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PAGE1O75459 146 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 GFPT2O94808 682 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FSBPO95073 299 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SEMA4FO95754 770 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TPM2P07951 284 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MMEP08473 750 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TFE3P19532 575 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SPINK2P20155 84 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NOS2P35228 1153 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MATKP42679 507 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ZBTB16Q05516 673 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 SEMA3BQ13214 749 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 AUHQ13825 339 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 KRT31Q15323 416 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FAM102AQ5T9C2 384 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 TTC39BQ5VTQ0 682 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FBXL22Q6P050 247 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NOP9Q86U38 636 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ERICH1Q86X53 443 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 MMAAQ8IVH4 418 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 ENOX1Q8TC92 643 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 IGSF8Q969P0 613 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 C18orf8Q96DM3 657 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NAA15Q9BXJ9 866 aaKnown RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 RSPH9Q9H1X1 276 aaPredicted RBP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PIGVQ9NUD9 493 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 NCKAP1Q9Y2A7 1128 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 HS3ST4Q9Y661 456 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 PI4KAP42356 2102 aa13.15□□□□□ -0.3
TSPAN9-IT1-201ENST00000539784 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 A0A1W2PP55 124 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 RNASEH2AO75792 299 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TOP3BO95985 862 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SRPRAP08240 638 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PSMD8P48556 350 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CSNK1EP49674 416 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SIM1P81133 766 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CST6Q15828 149 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FKBP15Q5T1M5 1219 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C9orf64Q5T6V5 341 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OTUD1Q5VV17 481 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SASS6Q6UVJ0 657 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 C14orf80Q86SX3 495 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PIP4P1Q86T03 277 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 XYLT1Q86Y38 959 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZDHHC17Q8IUH5 632 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 STK40Q8N2I9 435 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZNF397Q8NF99 534 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC20A1Q8WUM9 679 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CPA5Q8WXQ8 436 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 BIRC7Q96CA5 298 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CAMK1GQ96NX5 476 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TBCBQ99426 244 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 OMDQ99983 421 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ADAM33Q9BZ11 813 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TKTL2Q9H0I9 626 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GANQ9H2C0 597 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NLRC4Q9NPP4 1024 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FAM207AQ9NSI2 230 aaPredicted RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 DNAAF2Q9NVR5 837 aaKnown RBP13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FANCLQ9NW38 375 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 FBXL12Q9NXK8 326 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SERGEFQ9UGK8 458 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SNX10Q9Y5X0 201 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLCO1B1Q9Y6L6 691 aa13.14□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 A0A1B0GVT2 93 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 TARSL2A2RTX5 802 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 GOLGA6L22H0YM25 854 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ADCY5O95622 1261 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CD59P13987 128 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 VAV1P15498 845 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 CDH5P33151 784 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 NNMTP40261 264 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 POLR2FP61218 127 aaKnown RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ZNF177Q13360 481 aaPredicted RBP13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SLC12A1Q13621 1099 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 ACCSLQ4AC99 568 aa13.13□□□□□ -0.31
TSPAN9-IT1-201ENST00000539784 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms