RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 TP53INP2Q8IXH6 220 aa17.56■□□□□ 0.4
PCDHB17P-201ENST00000539533 TMEM169Q96HH4 297 aa17.56■□□□□ 0.4
PCDHB17P-201ENST00000539533 CCDC77Q9BR77 488 aa17.56■□□□□ 0.4
PCDHB17P-201ENST00000539533 OXCT2Q9BYC2 517 aaPredicted RBP17.56■□□□□ 0.4
PCDHB17P-201ENST00000539533 SOD2P04179 222 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 GAD2Q05329 585 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 TAF10Q12962 218 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 MORF4L2Q15014 288 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 ANKRD22Q5VYY1 191 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 ZCCHC9Q8N567 271 aaKnown RBP17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 CPT1BQ92523 772 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 FBXO32Q969P5 355 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 C9orf72Q96LT7 481 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 IL23AQ9NPF7 189 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 EURLQ9NYK6 297 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 FARP1Q9Y4F1 1045 aaPredicted RBP17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 BACE2Q9Y5Z0 518 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 TCRBV7S3A2A0A539 114 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 FAM92AA1XBS5 289 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 GOLGA8MH3BSY2 632 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 DCLK1O15075 740 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 UNC5CO95185 931 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 ERCC2P18074 760 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 ATF6P18850 670 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 TPI1P60174 286 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 BIRC2Q13490 618 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 RASIP1Q5U651 963 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 RELL1Q8IUW5 271 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 COLGALT1Q8NBJ5 622 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 C2orf15Q8WU43 125 aaKnown RBP17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 SPATA17Q96L03 361 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 OLFM3Q96PB7 478 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 YME1L1Q96TA2 773 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 LGMNQ99538 433 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 PITPNM3Q9BZ71 974 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 SIK2Q9H0K1 926 aa17.55■□□□□ 0.4
PCDHB17P-201ENST00000539533 PLXNA3P51805 1871 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 EME2A4GXA9 379 aaPredicted RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 RASA4BC9J798 803 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 RASA4O43374 803 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 EFCAB14O75071 495 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 LRIG2O94898 1065 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 TBX18O95935 607 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 IL9RQ01113 521 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 SLC45A4Q5BKX6 768 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 CAPRIN2Q6IMN6 1127 aaKnown RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 CMTR2Q8IYT2 770 aaKnown RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 FBF1Q8TES7 1133 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 RBM15Q96T37 977 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 SPATS2LQ9NUQ6 558 aaKnown RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 ARHGEF38Q9NXL2 777 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 FAM47DPA6NHR8 397 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 ZBBXA8MT70 800 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 RTN3O95197 1032 aaPredicted RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 BASP1P80723 227 aaKnown RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 SYCP2LQ5T4T6 812 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 FAM47EQ6ZV65 393 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 EGFL6Q8IUX8 553 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 MICAL1Q8TDZ2 1067 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 AUTS2Q8WXX7 1259 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 RTP4Q96DX8 246 aa17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 XPO7Q9UIA9 1087 aaKnown RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 MAGED2Q9UNF1 606 aaPredicted RBP17.54■□□□□ 0.4
PCDHB17P-201ENST00000539533 BAIAP3O94812 1187 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SEC24AO95486 1093 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SRGAP2BP0DMP2 458 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 CCR1P32246 355 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 HCAR3P49019 387 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 WDR4P57081 412 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 RPL10AP62906 217 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 DSG1Q02413 1049 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PAFAH1B3Q15102 231 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 TMED2Q15363 201 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 CDKL3Q8IVW4 592 aaPredicted RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PPIL6Q8IXY8 311 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 NAT8LQ8N9F0 302 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 CCDC110Q8TBZ0 833 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 MAML1Q92585 1016 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 ETNK1Q9HBU6 452 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SPG21Q9NZD8 308 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SHOC2Q9UQ13 582 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PTPRSQ13332 1948 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 GREB1Q4ZG55 1949 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 CFAP69A5D8W1 941 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PAGE1O75459 146 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 SMNDC1O75940 238 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 ATP2A2P16615 1042 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 LAG3P18627 525 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 GLUD2P49448 558 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 EFEMP1Q12805 493 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 HP1BP3Q5SSJ5 553 aaPredicted RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 UBE2Q1Q7Z7E8 422 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 PCGF5Q86SE9 256 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 ARHGAP18Q8N392 663 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 RIBC1Q8N443 379 aaPredicted RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 BADQ92934 168 aa17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 QKIQ96PU8 341 aaKnown RBP eCLIP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 RAB3IPQ96QF0 476 aaPredicted RBP17.53■□□□□ 0.4
PCDHB17P-201ENST00000539533 EPAS1Q99814 870 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms