RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 TCEAL3Q969E4 200 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 SIPA1Q96FS4 1042 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 RAB6CQ9H0N0 254 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PRSS16Q9NQE7 514 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 ITM2CQ9NQX7 267 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 RXFP3Q9NSD7 469 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 DLL3Q9NYJ7 618 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 USP36Q9P275 1121 aaKnown RBP16.16■□□□□ 0.18
CIT-210ENST00000539413 MYO6Q9UM54 1294 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 ERVW-1Q9UQF0 538 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 PAXBP1Q9Y5B6 917 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 FAM186AA6NE01 2351 aa16.16■□□□□ 0.18
CIT-210ENST00000539413 GVINP1Q7Z2Y8 2422 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 DMXL1Q9Y485 3027 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 AP5Z1O43299 807 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 FOXD2O60548 495 aaPredicted RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 ENDOD1O94919 500 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 MOCS3O95396 460 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 CCDC172P0C7W6 258 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 MZF1P28698 734 aaPredicted RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 ST8SIA6P61647 398 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 TPM4P67936 248 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 FANCCQ00597 558 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 C15orf59Q2T9L4 293 aaPredicted RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 CCDC14Q49A88 953 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 C5orf22Q49AR2 442 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 AASDHQ4L235 1098 aaPredicted RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 SH3PXD2AQ5TCZ1 1133 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 MON1BQ7L1V2 547 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 FAM131BQ86XD5 332 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 ZNF683Q8IZ20 524 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 OR52K2Q8NGK3 314 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 PIGKQ92643 395 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 SYT11Q9BT88 431 aa16.15■□□□□ 0.18
CIT-210ENST00000539413 CDV3Q9UKY7 258 aaKnown RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 MYO18AQ92614 2054 aaKnown RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 ATXN2Q99700 1313 aaKnown RBP16.15■□□□□ 0.18
CIT-210ENST00000539413 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.18
CIT-210ENST00000539413 C2CD4BA6NLJ0 364 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 PATE3B3GLJ2 98 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 CNTN5O94779 1100 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 CALB1P05937 261 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 KRT3P12035 628 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SDC4P31431 198 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 TPMTP51580 245 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 GSCP56915 257 aaPredicted RBP16.14■□□□□ 0.17
CIT-210ENST00000539413 ECT2LQ008S8 904 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SLC12A1Q13621 1099 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 PUM1Q14671 1186 aaKnown RBP eCLIP16.14■□□□□ 0.17
CIT-210ENST00000539413 ASIC2Q16515 512 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 CDO1Q16878 200 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SKOR2Q2VWA4 1001 aaPredicted RBP16.14■□□□□ 0.17
CIT-210ENST00000539413 ALFQ53S48 1182 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 LYSMD4Q5XG99 296 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 E4F1Q66K89 784 aaPredicted RBP16.14■□□□□ 0.17
CIT-210ENST00000539413 SLC41A1Q8IVJ1 513 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SELENOOQ9BVL4 669 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 TTYH3Q9C0H2 523 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 TMEM74BQ9NUR3 256 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 SUN2Q9UH99 717 aa16.14■□□□□ 0.17
CIT-210ENST00000539413 TNRC6BQ9UPQ9 1833 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 CKAP5Q14008 2032 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 EP300Q09472 2414 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 TTC34A8MYJ7 566 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 CLDN11O75508 207 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 SRPRAP08240 638 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 ACADMP11310 421 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 TNFAIP3P21580 790 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 ITPKAP23677 461 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 CD6P30203 668 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 RFC1P35251 1148 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 PTPN9P43378 593 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 STK19P49842 368 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 PLK1P53350 603 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 CDH4P55283 916 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 RPS14P62263 151 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 ZNF33AQ06730 810 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 C1QBPQ07021 282 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 ZNF177Q13360 481 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 HNRNPA1L2Q32P51 320 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 ARTNQ5T4W7 220 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 ACAD10Q6JQN1 1059 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 KDM1BQ8NB78 822 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 C3orf20Q8ND61 904 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 NETO1Q8TDF5 533 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 ALG14Q96F25 216 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 TOE1Q96GM8 510 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 RPL10LQ96L21 214 aaKnown RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 C1orf74Q96LT6 269 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 HAPLN3Q96S86 360 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 WSB2Q9NYS7 404 aaPredicted RBP16.13■□□□□ 0.17
CIT-210ENST00000539413 TAS2R14Q9NYV8 317 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 SLCO3A1Q9UIG8 710 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 THADAQ6YHU6 1953 aa16.13■□□□□ 0.17
CIT-210ENST00000539413 TCRBV5S1A1TA0A578 114 aa16.12■□□□□ 0.17
CIT-210ENST00000539413 DRGXA6NNA5 263 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms