RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 NOCTQ9UK39 431 aaKnown RBP15.46■□□□□ 0.07
RAB40B-202ENST00000538809 ERVW-1Q9UQF0 538 aa15.46■□□□□ 0.07
RAB40B-202ENST00000538809 DAAM1Q9Y4D1 1078 aa15.46■□□□□ 0.07
RAB40B-202ENST00000538809 KNL1Q8NG31 2342 aa15.46■□□□□ 0.07
RAB40B-202ENST00000538809 ACACBO00763 2458 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 LGALS16A8MUM7 142 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 M0QYT0 321 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SIN3BO75182 1162 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 MOCS3O95396 460 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 MMEP08473 750 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SLC2A3P11169 496 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 PDGFRAP16234 1089 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 ACSL1P33121 698 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 STK19P49842 368 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SULT1E1P49888 294 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SNX16P57768 344 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 WDR45BQ5MNZ6 344 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 RABGAP1LQ5R372 815 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 FAM102AQ5T9C2 384 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 ZNF776Q68DI1 518 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 FBXL22Q6P050 247 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 CCAR2Q8N163 923 aaKnown RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 MINDY1Q8N5J2 469 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 DEFB124Q8NES8 71 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SLC20A1Q8WUM9 679 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SNX19Q92543 992 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 IGSF8Q969P0 613 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 RPRD1AQ96P16 312 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 ERGIC2Q96RQ1 377 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 NUP58Q9BVL2 599 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 FBRSQ9HAH7 460 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 FAM207AQ9NSI2 230 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 PIGVQ9NUD9 493 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 KIAA1522Q9P206 1035 aaPredicted RBP15.45■□□□□ 0.06
RAB40B-202ENST00000538809 SUSD2Q9UGT4 822 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 VANGL2Q9ULK5 521 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 CHD5Q8TDI0 1954 aa15.45■□□□□ 0.06
RAB40B-202ENST00000538809 CHD8Q9HCK8 2581 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 A0A1B0GVM2 712 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 TCAF2A6NFQ2 919 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 TTC34A8MYJ7 566 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 GOLGA8SH3BPF8 625 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 ARHGAP33O14559 1287 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 PAGE1O75459 146 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 GFPT2O94808 682 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 LSM8O95777 96 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 DNTTP04053 509 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 C7P10643 843 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 MZF1P28698 734 aaPredicted RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 NOS2P35228 1153 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 SCNN1AP37088 669 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 MATKP42679 507 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 NOMO3P69849 1222 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 ZNF252P-AS1Q0IIN9 211 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 SYCP1Q15431 976 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 HNRNPA1L2Q32P51 320 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 FKBP15Q5T1M5 1219 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 NAA35Q5VZE5 725 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 CXorf57Q6NSI4 855 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 XYLT1Q86Y38 959 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 ZDHHC17Q8IUH5 632 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 AOPEPQ8N6M6 819 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 CADM4Q8NFZ8 388 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 RPL10LQ96L21 214 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 NPY6RQ99463 290 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 BPIFA3Q9BQP9 254 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 FUCA2Q9BTY2 467 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 C6orf106Q9H6K1 298 aaPredicted RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 SUN2Q9UH99 717 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 EIF2B4Q9UI10 523 aaKnown RBP15.44■□□□□ 0.06
RAB40B-202ENST00000538809 SNX10Q9Y5X0 201 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 HS3ST4Q9Y661 456 aa15.44■□□□□ 0.06
RAB40B-202ENST00000538809 METTL12A8MUP2 240 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ADCY5O95622 1261 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TPM2P07951 284 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 SRPRAP08240 638 aaKnown RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ATP1A3P13637 1013 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 GNSP15586 552 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 CHRNB2P17787 502 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 PMLP29590 882 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 SOX5P35711 763 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ECT2LQ008S8 904 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 GRIK2Q13002 908 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 AUHQ13825 339 aaKnown RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TTC31Q49AM3 519 aaPredicted RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ANO6Q4KMQ2 910 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TTC39BQ5VTQ0 682 aaPredicted RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 RNF219Q5W0B1 726 aaPredicted RBP15.43■□□□□ 0.06
RAB40B-202ENST00000538809 TRNP1Q6NT89 227 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 C14orf80Q86SX3 495 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ERICH1Q86X53 443 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 ZNF677Q86XU0 584 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 HDDC3Q8N4P3 179 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 OR52K2Q8NGK3 314 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 CPA5Q8WXQ8 436 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 DNASE2BQ8WZ79 361 aa15.43■□□□□ 0.06
RAB40B-202ENST00000538809 NT5C3BQ969T7 300 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms