RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 DSG1Q02413 1049 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 ICE2Q659A1 982 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 BNC2Q6ZN30 1099 aaPredicted RBP11.42□□□□□ -0.58
LINC00346-201ENST00000538077 NLRP9Q7RTR0 991 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 KLHL1Q9NR64 748 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CATSPERZQ9NTU4 200 aa11.42□□□□□ -0.58
LINC00346-201ENST00000538077 CCDC154A6NI56 674 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 HNRNPCP07910 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 PGAM1P18669 254 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 KBTBD12Q3ZCT8 623 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 KIRREL3Q8IZU9 778 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 PEX10O60683 326 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 TSC22D2O75157 780 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ZNF7P17097 686 aaPredicted RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 SERPINB3P29508 390 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 TUFMP49411 452 aaKnown RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 GRTP1Q5TC63 336 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 TAF2Q6P1X5 1199 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 UXS1Q8NBZ7 420 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 DNAJC9Q8WXX5 260 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FERD3LQ96RJ6 166 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 SLC4A5Q9BY07 1137 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FOXP3Q9BZS1 431 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 RNPEPQ9H4A4 650 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 DNMT3LQ9UJW3 386 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ATP5BP06576 529 aaKnown RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 THRAP10827 490 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 NFKB1P19838 968 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ATP5C1P36542 298 aaKnown RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 IRX1P78414 480 aaPredicted RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 CDH17Q12864 832 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 COLGALT2Q8IYK4 626 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 MAB21L3Q8N8X9 362 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 PPP1R16AQ96I34 528 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 EXOC2Q96KP1 924 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ABCC13Q9NSE7 274 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 NR2E3Q9Y5X4 410 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 GSAPA4D1B5 854 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 SMIM22K7EJ46 135 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ACKR2O00590 384 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 INPP4BO15327 924 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 FLT3P36888 993 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 TAF13Q15543 124 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 CRY1Q16526 586 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 DGKKQ5KSL6 1271 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ZCCHC8Q6NZY4 707 aaKnown RBP11.41□□□□□ -0.58
LINC00346-201ENST00000538077 IL27RAQ6UWB1 636 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 C7orf61Q8IZ16 206 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 OR6K2Q8NGY2 324 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ACTL9Q8TC94 416 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 TBCDQ9BTW9 1192 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 ACP6Q9NPH0 428 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 KBTBD4Q9NVX7 518 aa11.41□□□□□ -0.58
LINC00346-201ENST00000538077 NEDD8-MDP1E9PL57 170 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 CXCL14O95715 111 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 GPR1P46091 355 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 NOMO2Q5JPE7 1267 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 EPHX4Q8IUS5 362 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 OSBPL6Q9BZF3 934 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 UBDO15205 165 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ZW10O43264 779 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 FAM20BO75063 409 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 CLTBP09497 229 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ZSCAN5DPP0CG00 497 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 HDCP19113 662 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ITGA9Q13797 1035 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 AP5B1Q2VPB7 878 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 C2orf73Q8N5S3 287 aaPredicted RBP11.4□□□□□ -0.58
LINC00346-201ENST00000538077 IPCEF1Q8WWN9 437 aaPredicted RBP11.4□□□□□ -0.58
LINC00346-201ENST00000538077 HGH1Q9BTY7 390 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 VTI1BQ9UEU0 232 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 BANF1O75531 89 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 RPLP2P05387 115 aaKnown RBP11.4□□□□□ -0.58
LINC00346-201ENST00000538077 IL5RAQ01344 420 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ATAD3BQ5T9A4 648 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 SERPINA13PQ6UXR4 307 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 SLC22A9Q8IVM8 553 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 DPP10Q8N608 796 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ENGASEQ8NFI3 743 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 SYBUQ9NX95 663 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ARL15Q9NXU5 204 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 AKAP7Q9P0M2 348 aaPredicted RBP11.4□□□□□ -0.58
LINC00346-201ENST00000538077 PSMB4P28070 264 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 MIPP30301 263 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 WASP42768 502 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ABRQ12979 859 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 SPIDRQ14159 915 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 RGMBQ6NW40 437 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 PARGQ86W56 976 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 CCDC103Q8IW40 242 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 SPATA6LQ8N4H0 392 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 ZSCAN18Q8TBC5 510 aaPredicted RBP11.4□□□□□ -0.58
LINC00346-201ENST00000538077 BCL2L14Q9BZR8 327 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 CARD9Q9H257 536 aa11.4□□□□□ -0.58
LINC00346-201ENST00000538077 EFCAB1Q9HAE3 211 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms