RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 ZNF169Q14929 603 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ACOX1Q15067 660 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PWP2Q15269 919 aaKnown RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 RPS6KA2Q15349 733 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ZIK1Q3SY52 487 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 CRY2Q49AN0 593 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PARP10Q53GL7 1025 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PCID2Q5JVF3 399 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 AKNAD1Q5T1N1 836 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 RINT1Q6NUQ1 792 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 SRFBP1Q8NEF9 429 aaKnown RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 OR6Y1Q8NGX8 325 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM171Q8WVE6 324 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 TFAP2BQ92481 460 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 DAZAP1Q96EP5 407 aaKnown RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ZSCAN31Q96LW9 406 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 CCDC17Q96LX7 622 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 HS6ST2Q96MM7 605 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 TESK2Q96S53 571 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 GDF15Q99988 308 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 RTKNQ9BST9 563 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 KATNAL1Q9BW62 490 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 RNF26Q9BY78 433 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PPCSQ9HAB8 311 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 DUSP22Q9NRW4 184 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 LIN7CQ9NUP9 197 aaKnown RBP3.71□□□□□ -1.82
SNHG1-202ENST00000535689 SYBUQ9NX95 663 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 NDUFAF4Q9P032 175 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 KIF17Q9P2E2 1029 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 TLK1Q9UKI8 766 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 SLC27A6Q9Y2P4 619 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ATP6V0A2Q9Y487 856 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 ENTPD2Q9Y5L3 495 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 SNX14Q9Y5W7 946 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 HEG1Q9ULI3 1381 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 PAPPA2Q9BXP8 1791 aa3.71□□□□□ -1.82
SNHG1-202ENST00000535689 COL11A2P13942 1736 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 CCDC78A2IDD5 438 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ZAR1LA6NP61 321 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 HMGB1P1B2RPK0 211 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 H7C1Q1 480 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 NPC1O15118 1278 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 PROP1O75360 226 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 RNF8O76064 485 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ZFPL1O95159 310 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ANXA6P08133 673 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 EBLN1P0CF75 366 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 HOXD10P28358 340 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 CYP2C18P33260 490 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 CHKAP35790 457 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 MPLP40238 635 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 HALP42357 657 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 AARSP49588 968 aaKnown RBP eCLIP3.7□□□□□ -1.825e-21■□□□□ 9.8
SNHG1-202ENST00000535689 CACNA2D1P54289 1103 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 DGCR2P98153 550 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ZXDAP98168 799 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 HOXA4Q00056 320 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 SP3Q02447 781 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 SCAPQ12770 1279 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 EFR3AQ14156 821 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 KCNAB1Q14722 419 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 PTCHD3Q3KNS1 767 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 SLC9C1Q4G0N8 1177 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ABLIM2Q6H8Q1 611 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 TANGO2Q6ICL3 276 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 NFRKBQ6P4R8 1299 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 TMEM88Q6PEY1 159 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 Q6ZWC4 215 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 GGNQ86UU5 652 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 CLASRPQ8N2M8 674 aaKnown RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 C12orf76Q8N812 135 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ATG16L2Q8NAA4 619 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 AGBL3Q8NEM8 1001 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 R3HDM4Q96D70 268 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 PDLIM2Q96JY6 352 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 UROC1Q96N76 676 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 TIMP4Q99727 224 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 MLST8Q9BVC4 326 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 BRD8Q9H0E9 1235 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 NOD2Q9HC29 1040 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 OBP2BQ9NPH6 170 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 MRPS18AQ9NVS2 196 aaKnown RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 FNIP2Q9P278 1114 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 ADAMTS5Q9UNA0 930 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 C19orf53Q9UNZ5 99 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 PCDHB7Q9Y5E2 793 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 HS3ST3A1Q9Y663 406 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 WNT6Q9Y6F9 365 aa3.7□□□□□ -1.82
SNHG1-202ENST00000535689 MORC2Q9Y6X9 1032 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-202ENST00000535689 COL6A3P12111 3177 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 TRIOBPQ9H2D6 2365 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 UBR2Q8IWV8 1755 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 COL4A3Q01955 1670 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 CCDC196A0A1B0GTZ2 297 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 LGALS16A8MUM7 142 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 ADM5C9JUS6 153 aa3.69□□□□□ -1.82
SNHG1-202ENST00000535689 HNRNPRO43390 633 aaKnown RBP3.69□□□□□ -1.82
SNHG1-202ENST00000535689 ACTL6BO94805 426 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms