RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 CEBPBP17676 345 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 TNFRSF8P28908 595 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 TTC39BQ5VTQ0 682 aaPredicted RBP23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 HEATR6Q6AI08 1181 aaKnown RBP23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 RFWD3Q6PCD5 774 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 CCDC33Q8N5R6 958 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 CCNYQ8ND76 341 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 ING5Q8WYH8 240 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 DPH5Q9H2P9 285 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 C10orf88Q9H8K7 445 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 PCDH9Q9HC56 1237 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 TDP1Q9NUW8 608 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 COLQQ9Y215 455 aaPredicted RBP23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 NEU2Q9Y3R4 380 aa23.56■■□□□ 1.36
RBFOX1-206ENST00000535565 TYW5A2RUC4 315 aaKnown RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 BHMG1C9JSJ3 638 aaPredicted RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 HOXB8P17481 243 aaPredicted RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 RBL1P28749 1068 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 ACTN2P35609 894 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 DRG2P55039 364 aaKnown RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 GALNT2Q10471 571 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 BRD3Q15059 726 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 TRIP13Q15645 432 aaPredicted RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 ALFQ53S48 1182 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 B4GALNT4Q76KP1 1039 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 TFAP2DQ7Z6R9 452 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 GPR149Q86SP6 731 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 FAM71DQ8N9W8 422 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 SH3RF2Q8TEC5 729 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 CASKIN2Q8WXE0 1202 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 IFT81Q8WYA0 676 aa23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 SMG9Q9H0W8 520 aaKnown RBP23.55■■□□□ 1.36
RBFOX1-206ENST00000535565 SHROOM3Q8TF72 1996 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 CDH23Q9H251 3354 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 GREM1O60565 184 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 ERLIN1O75477 346 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 CNTN5O94779 1100 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 ADCY8P40145 1251 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 MAPKAPK2P49137 400 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 IRAK1P51617 712 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 AP1B1Q10567 949 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 ITFG1Q8TB96 612 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 HDAC11Q96DB2 347 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 CELF6Q96J87 481 aaKnown RBP23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 LGMNQ99538 433 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 KLC2Q9H0B6 622 aa23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 ZFP37Q9Y6Q3 630 aaPredicted RBP23.54■■□□□ 1.36
RBFOX1-206ENST00000535565 E2F8A0AVK6 867 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 DFFAO00273 331 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 FSHRP23945 695 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 GARSP41250 739 aaKnown RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 VPS41P49754 854 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 NDST2P52849 883 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 GDF10P55107 478 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 CDH4P55283 916 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 ADAM15Q13444 863 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 PRKD1Q15139 912 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 KCTD19Q17RG1 926 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 FAM217AQ8IXS0 508 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 UMODL1-AS1Q8N2C9 162 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 EIF1ADQ8N9N8 165 aaKnown RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 NETO2Q8NC67 525 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 USP13Q92995 863 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 RTP4Q96DX8 246 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 SNF8Q96H20 258 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 PRICKLE1Q96MT3 831 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 APOL5Q9BWW9 433 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 TTYH1Q9H313 450 aaPredicted RBP23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 USP29Q9HBJ7 922 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 SNX24Q9Y343 169 aa23.53■■□□□ 1.36
RBFOX1-206ENST00000535565 CCDC151A5D8V7 595 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 STK10O94804 968 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 OR1E1P30953 314 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CHKAP35790 457 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 RPL21P46778 160 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 PPIDQ08752 370 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CALCOCO2Q13137 446 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 HLTFQ14527 1009 aaKnown RBP eCLIP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 MAP9Q49MG5 647 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CCNI2Q6ZMN8 369 aaPredicted RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CIR1Q86X95 450 aaPredicted RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 LRRC49Q8IUZ0 686 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CFAP52Q8N1V2 620 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 ATPAF2Q8N5M1 289 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 HTR3CQ8WXA8 447 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 MYEOVQ96EZ4 313 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 NDFIP2Q9NV92 336 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CCL26Q9Y258 94 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 NYNRINQ9P2P1 1898 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 A0A1B0GVM2 712 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 TCAF2A6NFQ2 919 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 TRDMT1O14717 391 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 SCAMP3O14828 347 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 MTSS1O43312 755 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 TSPAN3O60637 253 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CLDN11O75508 207 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 TCF3P15923 654 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 CARSP49589 748 aaKnown RBP23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 ZNF33AQ06730 810 aa23.52■■□□□ 1.36
RBFOX1-206ENST00000535565 GRIN2CQ14957 1233 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms