RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 TRIM24O15164 1050 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 PAICSP22234 425 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 MYCBPAPQ8TBZ2 947 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF112Q9UJU3 913 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CROTQ9UKG9 612 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 HPSEQ9Y251 543 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 VPS4BO75351 444 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 SLITRK3O94933 977 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CDH8P55286 799 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 IRX1P78414 480 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 BEX3Q00994 111 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CCDC149Q6ZUS6 474 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 EID3Q8N140 333 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 POLR1EQ9GZS1 481 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 DNALI1O14645 258 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 TOMM20Q15388 145 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 OASLQ15646 514 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 FGD3Q5JSP0 725 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 DGKKQ5KSL6 1271 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 WDR93Q6P2C0 686 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 PALB2Q86YC2 1186 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 TMEM132CQ8N3T6 1108 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 APBA2Q99767 749 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 GAKO14976 1311 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CES2O00748 559 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 TRIM13O60858 407 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 GUCY1B2O75343 617 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CABYRO75952 493 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CCR4P51679 360 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CSNK2BP67870 215 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 PURAQ00577 322 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CRY1Q16526 586 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 PAGE2BQ5JRK9 111 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 DEFB107AQ8IZN7 70 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 OR8H2Q8N162 312 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 ST13P5Q8NFI4 369 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 CXorf40AQ8TE69 158 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 STARD8Q92502 1023 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 DNAJC1Q96KC8 554 aaKnown RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 SENP6Q9GZR1 1112 aaPredicted RBP18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 RAD21L1Q9H4I0 556 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 ARHGAP20Q9P2F6 1191 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 ATP6V1HQ9UI12 483 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 MSRAQ9UJ68 235 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 SALL1Q9NSC2 1324 aa18.51■□□□□ 0.55
SFSWAP-203ENST00000535236 A0A096LPK6 155 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 WNT10BO00744 389 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 SLC9A3R1O14745 358 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 RGS14O43566 566 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 KIF1CO43896 1103 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 NDUFS2O75306 463 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 OR6A2O95222 327 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 NYAP1Q6ZVC0 841 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 MOSPD2Q8NHP6 518 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 TRIM8Q9BZR9 551 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 ENOPH1Q9UHY7 261 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 NR2E3Q9Y5X4 410 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 MADDQ8WXG6 1647 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 CCDC189A1A4V9 331 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 VAV1P15498 845 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 OTOP1Q7RTM1 612 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 ARHGEF3Q9NR81 526 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 IL1RAPL1Q9NZN1 696 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 MARCH2Q9P0N8 246 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 OPTCQ9UBM4 332 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 ZNF135P52742 658 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 PTENP60484 403 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 CNTN2Q02246 1040 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 FASTKQ14296 549 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 INSCQ1MX18 579 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 CBWD6Q4V339 395 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM126BQ8IXS8 530 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM45AQ8TCE6 357 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 VAT1Q99536 393 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 MRPL42Q9Y6G3 142 aaKnown RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 LRRC14BA6NHZ5 514 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 KCNK1O00180 336 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 INAQ16352 499 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 SLC45A4Q5BKX6 768 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 COLGALT2Q8IYK4 626 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 STK40Q8N2I9 435 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 CYP2W1Q8TAV3 490 aa18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 INO80Q9ULG1 1556 aaPredicted RBP18.5■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM86B1E9PN63 330 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 PEX1O43933 1283 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 LGALS2P05162 132 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 FAM86B2P0C5J1 330 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ATP5C1P36542 298 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 COX10Q12887 443 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 CYB5D1Q6P9G0 228 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ANKRD7Q92527 254 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 PAIP2BQ9ULR5 123 aaKnown RBP18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 UNC13BO14795 1591 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 SMIM31A0A1B0GVY4 71 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 H3BN98 237 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 FKBP6O75344 327 aa18.49■□□□□ 0.55
SFSWAP-203ENST00000535236 IFNGR2P38484 337 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms