RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 HAPLN3Q96S86 360 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 TRPV6Q9H1D0 765 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 C12orf65Q9H3J6 166 aaKnown RBP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 CHST7Q9NS84 486 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 FAIMQ9NVQ4 179 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ARHGAP26Q9UNA1 814 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 PPME1Q9Y570 386 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 C17orf102A2RUQ5 167 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 CFLARO15519 480 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ZBED1O96006 694 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 PABPC4LP0CB38 370 aaKnown RBP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ENPEPQ07075 957 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 KRT72Q14CN4 511 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 TAS2R42Q7RTR8 314 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 UBL4BQ8N7F7 174 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ACTRT1Q8TDG2 376 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ACAP3Q96P50 834 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 MCEEQ96PE7 176 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 HEMGNQ9BXL5 484 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 EHD1Q9H4M9 534 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 WDR70Q9NW82 654 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 ANAPC5Q9UJX4 755 aa9.27□□□□□ -0.93
SF3B2-216ENST00000534765 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.27□□□□□ -0.93
SF3B2-216ENST00000534765 LOC100653049A0A140TA62 436 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PSMD11O00231 422 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ATP9BO43861 1147 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 KRT34O76011 436 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 MICAL2O94851 1124 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ATF2P15336 505 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 GPD2P43304 727 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 FOLH1Q04609 750 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SULT2A1Q06520 285 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NSUN2Q08J23 767 aaKnown RBP eCLIP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PDK1Q15118 436 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PAN2Q504Q3 1202 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 KCNT1Q5JUK3 1230 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TCHHL1Q5QJ38 904 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PMF1Q6P1K2 205 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SLC27A1Q6PCB7 646 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TTC7BQ86TV6 843 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ACOT1Q86TX2 421 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PPP4R1Q8TF05 950 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 LINC01599Q8WXQ3 324 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PPP1R10Q96QC0 940 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PEBP4Q96S96 227 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 MIPEPQ99797 713 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TIMMDC1Q9NPL8 285 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TMPRSS4Q9NRS4 437 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TTC7AQ9ULT0 858 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ST3GAL5Q9UNP4 418 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NAALADL1Q9UQQ1 740 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TIMM13Q9Y5L4 95 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 MUC3AQ02505 3323 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NLRC5Q86WI3 1866 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ATP8B3O60423 1300 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TEX28O15482 410 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CCDC130P13994 396 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 GFAPP14136 432 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PTGIRP43119 386 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 MRPS15P82914 257 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PDAP1Q13442 181 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 MPP2Q14168 576 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TRIM71Q2Q1W2 868 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SMTNL2Q2TAL5 461 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 AGMOQ6ZNB7 445 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CLNKQ7Z7G1 428 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 IFT43Q96FT9 208 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 RNF38Q9H0F5 515 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 UPF3AQ9H1J1 476 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 BCAP29Q9UHQ4 241 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 VWA8A3KMH1 1905 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CLDN5O00501 218 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ACAT1P24752 427 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PCSK6P29122 969 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 EEF1DP29692 281 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CD52P31358 61 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 RGS7P49802 495 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CPT1AP50416 773 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NKX2-5P52952 324 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PITX1P78337 314 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 BASP1P80723 227 aaKnown RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SFT2D3Q587I9 215 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 C9orf57Q5W0N0 161 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 C11orf63Q6NUN7 778 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 XKR5Q6UX68 686 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NEK10Q6ZWH5 1172 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ACAD11Q709F0 780 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 UBE2Q1Q7Z7E8 422 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 NETO2Q8NC67 525 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 RFWD2Q8NHY2 731 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 DACT3Q96B18 629 aaPredicted RBP9.26□□□□□ -0.93
SF3B2-216ENST00000534765 ANKRD36BP1Q96IX9 119 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SLX1AQ9BQ83 275 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TRIM39Q9HCM9 518 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 XPNPEP3Q9NQH7 507 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 CNTN3Q9P232 1028 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 TXNDC16Q9P2K2 825 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 PCDHGA3Q9Y5H0 932 aa9.26□□□□□ -0.93
SF3B2-216ENST00000534765 SNX9Q9Y5X1 595 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms